Trichophyton verrucosum: TRV_00210
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Entry
TRV_00210 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
tve
Trichophyton verrucosum
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tve03009
]
TRV_00210
Ribosome biogenesis [BR:
tve03009
]
Eukaryotic type
90S particles
Other 90S particles
TRV_00210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
Spt6_S1
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
Suf
TPR_14
TPR_19
NRDE-2
Cue1_U7BR
Motif
Other DBs
NCBI-GeneID:
9581808
NCBI-ProteinID:
XP_003025570
UniProt:
D4CZG8
LinkDB
All DBs
AA seq
1799 aa
AA seq
DB search
MAQIKRKGHGQDEPSSSMPKKKAKVDAEELNGASKPKKKSKEPKEQKEQKETVKANKKDT
SAVSKAAPISMLRDEQPAFPRGGNNVLTPLERKQIQIQATKDVLFEQKGKNGAEFANSED
EGSLGAAEDKKDAGTKSKKRKAKASKTKEAPAAAKQGVKVESLTYKVRSDATTVVKSDHQ
LIDNSVLRKVEAMLGDDKSEDEEDEDDDLELKNYVKVGQYLRAAVTATIRNEDDRKVKNK
KHIELSIEPHAANSGLTKADMVVNATVQASVVSVEDHGLVMDLGLEENEAKGFISSRELP
AGVDISTVKEGSVFLCIVTGQNASGTVIKLSADLASAGSVKKAHFLNTAPTINAFLPGTA
AEILITEVTPRGMIGKIMGMLDAVVDVIHSGASDGKKDLTTKYHAGAKIKGRLITTYPSS
DPIKLGFSILDSVLKFSPTATLVNGADDDLPSISDIIPEVKVTYVDSSLGLYVQLGSTKH
QGFVHLSRLADGRVDSISSIEGPYKVGSTHEGRIIGFSAMDNLFLVSLEPKIIEQPFFRL
EDVTVGSVVKGKIEKLLIKPEGINGLIVSLTDSISGLVPEMHMADTKLQHPEKKFREGLK
VSVRVLSVDLQKRQLRLTLKKSLLNSDSAPWKDYESISAGSRSPGTLIKIQNNGAIVQFY
GSVKGFLPVSEMSEAYIKDPSQHFTVGQVVNVHALTVDAENERLVVSCKDPSTVTADYQS
AFENVHPGLVVSGTVFEKSSDDLLIKLQDSGLIARLTSNHISDGSATKRTSTLNRIRVGQ
KMDGLLVYRVKKSHRLIEVTNKATLKEAAAEGRLPAKFEDIKHGLKVTGIVKNIIPEGIF
VEFLDNLTGLIPKRLVDDDHTSRPDFGYSRFQVISATVCAVQEDSDRFLLSLKPVSKPKQ
QSDSSSASEKKAPAVVLNNPIDEELKAMEDIVVGKITKAKITSVKDTQLNVVLADNVQGR
IDISEIFDSWEDIKDRKRPLKSFHSKEILPVRVLGIHDARNHKFLPISHRAGKVSVYELS
TKRSCLQASEFKPLHLEQLKVGERYIGFVNNIAEDCLWLNISPNVRGRLRITDISDDISI
RGNIQKNFPIGSALQVAVTGIDAEKNRLDLSARIGSSAKTLTVADLSKGMILVGRVTKIT
DRQVLVQINDNVVGAVSLIDMADDYTKVNPTNFHKNEALRVCVVDVDIPNKKICFSVRPS
KVLSSSLPVVDPEITSIDNLKVGQIVRGFVRRVDNIGVFVTLGHDVTAYIRVSDLSDSFL
KEWKDEFQVDQLVQGRLTVVDKDNNKVQMTLKKSALDPNYKPPFTLKDLKVGQIVTGKVR
KVEEYGAFIAIDGSANLSGLCHRSEMAEKRVEDATQLYEKDDIVKAKVLKVDLEKGQIAL
GLKASYFRDLPEEEESDANSSDDEAGGIKLDVGSDSDDDVSMGGVDLEGEDDEEEEEDSD
EDIEMENAPDSTKKSGLVTSGFDWTGDGDKDMNEAADESTEDDGATKRKKRRKAEIQVDR
TGDLDANGPQTVADYERLLLGEPDSSLLWLKYMAFQLELGEVDKAREIADRALRTMSIGQ
DTEKLNVWVARLNLENTFGNDDTLDEVFKSACEYNDAHEIYDRMTSIFIQSGKAEKADEL
FQTALKKKVSSTPDFFLNYANFLFDTMEAPQRGRDLLPRALQSLPPHTHVEVTSRFGQLE
FRSPNGGIERGRTVFEGLLSSFPKRIDLWNVLLDLEIKVGDEEQVRRLFERVLGIGHGVV
AADGTKGGPKKKLKEKQAKFLFKKWLAFEEKIAPEGDTKMVDEVKARAADYVRSIKGDA
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagataaagaggaaaggccacggccaggatgagccaagcagctctatgccgaag
aaaaaggccaaggtggacgctgaagagctcaatggcgcttcaaagccgaagaagaaatca
aaggagccaaaggagcagaaggaacagaaggagaccgtgaaagcgaacaagaaggataca
agcgccgtttcgaaagctgcgccgatatcaatgctgcgagatgaacagcctgcctttcct
cggggtggtaacaacgtgctcacccctcttgaacggaagcagatacagattcaagctacc
aaggacgtcttattcgagcaaaaggggaagaatggtgctgaatttgcgaatagtgaggac
gaaggaagcttgggcgcagcagaagataagaaggatgctggtaccaaatcgaagaaaaga
aaagcaaaggcatcgaagaccaaagaggcgccagcagcagctaaacagggagtgaaggtt
gaatccctcacttacaaggtaagaagtgatgctactacagttgtcaaatctgatcatcaa
ctaattgataatagcgtattgcgaaaagttgaggctatgctaggagatgacaagagtgaa
gacgaggaggacgaggacgatgaccttgagttgaagaactatgtcaaagttggacaatat
ttgcgcgcagccgtcaccgccactatccgaaatgaggatgacaggaaagtgaaaaacaag
aaacatattgagctctctattgaacctcatgccgcaaattcgggtctaacaaaggccgat
atggtggtcaatgctacagtccaagcctcggttgtaagtgtcgaagatcatggcctcgtt
atggatctgggcttggaagagaatgaagccaaggggttcatttcctctcgagagttacct
gcgggagttgacatatccactgttaaagagggctcggtcttcctatgcattgttaccggt
caaaacgctagcgggactgtcatcaagctctctgcagacctcgcttccgctggttctgtc
aaaaaggcccatttcctaaacacggcgccaactatcaatgcatttctaccaggcactgcc
gccgagatactaattactgaagtgaccccccgcgggatgattggaaaaatcatgggaatg
ctagatgctgtggtagacgttattcactctggagctagcgacgggaaaaaggacctgact
acaaagtatcatgcaggtgcaaagatcaagggccggctcatcaccacatacccctccagt
gatccaatcaaacttggtttctccattcttgacagtgttctgaagttctctcccacggcc
acccttgtgaatggagccgatgatgacctgccatcaatctcagatataatacccgaagtt
aaggttacctatgtcgatagctctctgggattgtacgttcaactgggctctaccaaacat
caagggttcgtacatctttccaggcttgcagatggacgagttgattctatttcctctatt
gagggaccctataaagtaggctcaactcacgaaggcaggataattggcttcagtgctatg
gacaacctgttcttggtgtccttggagccaaagattattgaacagcccttcttccgtctc
gaagatgtgaccgttggtagcgttgtgaagggaaagattgagaaacttctcattaagccg
gaaggtatcaatgggttgatagtctctttgacagatagcatttctggccttgtaccagaa
atgcatatggctgacaccaaactacaacacccggagaagaaattccgggagggtctcaaa
gtctccgttcgagttttgtccgttgatctacaaaagcgtcagctcaggttgaccctgaaa
aagtcacttctgaacagtgattcagctccttggaaggactacgaaagcatctcggcaggc
agtcgatccccgggaaccctgatcaaaattcagaataatggcgcgattgtgcagttctat
ggctccgtgaagggcttcctcccagtctccgagatgagcgaagcctacattaaagaccct
tcgcaacattttactgttggtcaagtcgtcaatgtacatgctcttaccgttgacgcagag
aatgaaagattggttgtctcttgcaaggatccctctactgtgactgcagactaccaatcc
gcttttgaaaatgttcatccaggacttgtagtttctggaaccgttttcgaaaagtcaagc
gatgacttgcttatcaaattacaggactccggcctgatcgcaagacttacttccaaccat
atttccgacggctccgcgacaaaacgtacgtccactctgaaccgtatcagagttggtcag
aagatggacggtcttttagtttacagagtgaagaaatcccaccgcctcatcgaagttacc
aacaaagctactctcaaggaagctgccgctgagggaaggttaccagccaaatttgaagac
atcaaacacggtttgaaagtaacgggcattgtcaagaatatcatccccgagggaatattt
gtggaatttttggataacctcaccggcctgatacctaagcgcttggttgacgatgatcat
acttctcgacctgatttcggatacagtcgattccaggtgatctccgctacagtttgtgcc
gtacaagaggattcggaccgtttccttcttagtctaaaacctgtgtcaaagcccaaacag
cagtctgactccagctcagcatcagaaaagaaggctcctgctgtggtcttgaataatccc
attgatgaggaactgaaggctatggaggacattgtagttgggaagatcaccaaagccaaa
atcacatcggtcaaggatactcagctcaatgttgttctagctgacaacgttcaaggaaga
atcgatatttctgaaatattcgactcctgggaagacatcaaggaccgaaaacgccctctt
aaatcattccactccaaggaaattctcccagtcagggttcttggaattcatgacgctcga
aatcacaagttcctgcctatcagccatcgggctggtaaagtatcggtttacgagctctct
actaagcgcagctgccttcaggcgagtgagttcaaacctcttcatcttgaacaacttaag
gttggggaacgttatatcggattcgtgaacaacattgcggaagactgtctatggttgaac
atttcacccaatgtgcgagggcggcttcgcatcactgacatttccgacgatatttcaatc
agaggaaatattcagaagaatttccctatcggctcggcactgcaagtggctgtaaccggg
atagacgctgagaaaaatcgacttgacttgtcagcaaggatcggaagttcagctaagaca
ttgaccgttgcagacctatccaagggtatgatcctggtgggacgagtcaccaaaataact
gaccgccaagtgctggtccaaattaatgacaatgttgtcggtgctgtttctcttattgat
atggccgatgactataccaaggtcaacccaaccaacttccacaagaatgaagctctgcgt
gtctgtgttgtcgatgtcgatattccaaacaagaagatttgtttctccgttcgaccatca
aaggttcttagttcctcgttgcctgttgtcgatcctgaaataacttcaatcgataacctc
aaggtcggccagatcgtccgtgggtttgttcgaagagttgacaacattggagtcttcgtg
actctaggacatgatgtgaccgcttatatccgagtttcagatctttcggattcgtttttg
aaggagtggaaggatgagttccaggttgaccagctcgttcaaggtagacttacagtcgtg
gacaaggacaataacaaggtacagatgacactgaagaaatcagcgttggatcccaactat
aaaccgcctttcactctaaaggacttaaaggttggtcaaattgttaccggtaaggttcgg
aaggtcgaagagtatggtgctttcattgccattgacggcagtgccaacctaagtgggttg
tgtcacaggtccgagatggcggagaagcgtgtcgaagatgctacccagctgtacgaaaag
gatgacatcgtcaaggcaaaggtcttgaaagttgatctggagaaaggccaaatcgcgcta
ggcttgaaagcatcatacttcagggatctcccagaagaggaagagagcgacgccaattcc
agtgatgatgaagcaggcggtatcaagcttgatgttggaagcgattcggacgacgatgta
tctatgggaggggttgaccttgaaggagaagacgacgaagaggaagaggaagatagtgat
gaagatattgaaatggaaaacgctcctgatagcactaaaaagagcggacttgttacctct
ggctttgactggactggcgatggagataaagacatgaatgaggctgccgatgagtctact
gaggatgatggcgctaccaagaggaaaaagcgccggaaagctgagattcaagtggacaga
actggcgacctggatgctaatggaccccagactgttgctgactatgagcggttacttctt
ggagagccagattctagtctgttgtggttgaagtacatggctttccagttggagctggga
gaagtggacaaggcaagagaaattgccgatcgtgctttgcgaaccatgagtatcggacaa
gatacagagaagctcaatgtctgggttgcacggctcaatctggaaaatacctttggcaat
gacgacactcttgacgaggtcttcaagagcgcctgcgagtataacgatgctcatgaaata
tacgacaggatgacaagcatattcattcaatcgggcaaagcagagaaagcggatgagctt
ttccaaactgccttgaagaaaaaggtctcttccactccagatttcttcttaaactatgca
aacttcctgtttgataccatggaagctcctcagcgtggccgtgacctactcccccgtgca
ttgcaatccctacctccccatacccatgttgaagttacatccagatttggtcagctggaa
ttccgctcccctaacggaggtatcgagcgtggaagaacagtatttgagggtctcttgtcc
tcgttccccaagcgcattgatttgtggaatgtgttgttggatttggaaatcaaagttggt
gatgaagagcaagtgagacggctctttgagcgcgtgcttggaatcggccatggtgttgtc
gcagccgatggaaccaaaggaggtcccaaaaagaaactaaaagaaaagcaagccaaattc
cttttcaaaaaatggcttgcgtttgaagagaagattgcccctgaaggagatacgaagatg
gtggacgaagtcaaagctcgtgccgcagattatgtcagatctatcaaaggagatgcttga
DBGET
integrated database retrieval system