Trichophyton verrucosum: TRV_00397
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Entry
TRV_00397 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
tve
Trichophyton verrucosum
Pathway
tve03013
Nucleocytoplasmic transport
tve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRV_00397
03015 mRNA surveillance pathway
TRV_00397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tve03019
]
TRV_00397
03041 Spliceosome [BR:
tve03041
]
TRV_00397
Messenger RNA biogenesis [BR:
tve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
TRV_00397
Spliceosome [BR:
tve03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
TRV_00397
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
DUF8142
DUF7337
Auts2
Motif
Other DBs
NCBI-GeneID:
9581693
NCBI-ProteinID:
XP_003025457
UniProt:
D4D003
LinkDB
All DBs
AA seq
579 aa
AA seq
DB search
MEQWPFDKKGITMEKADSSSPEIRAKKIFACGFSQKQGGCFDLSMFCSFDSRNFGSMADL
VSLEWDIENSRSFVSPPLTWNRWNWVDGSNPFPWQIPKSAKRQQKDNHRDKQQRRRDRSE
KELQRRRQRAAIMDAKLLKTTKFPPEFAKKVDMTKVNIEVMKKWIAERISDILGNEDDVV
IELCFNLLEGSRFVRGQTDSRLLVSLLRVEFDGLTINLTGFLEKDTAKFCKDLWNLCLSA
QDSPQGVPKELLEAKKLELMQEQRESGGERERIVAVAEEAAVALLVELIGTTAEILPRLI
DGDEAHRFTEIHLAGEQISTFPAVVEAIDEMIIEGAARRDSPLLRRPGHHHALSRQFGTV
DGIGGLPKEGGGVRPAALAHLIEVTVTVTVTVAGNEPAARPMMTTPGPQAARRPEEDGED
REAEALSLHPLLVIGLRDPVVHLHYDLRRGQVARVIGEVGALGGDPLCTNKGLDVMYLEL
ILLKIAEVTTTAGLAAAVAAVAAAVAIEREAGVEAAEDTAEDSGRPAAGHRRAAHVAAAA
AAAAVAGGGINLLKDMPQLDAGRARTVLPLHHLLKSDRE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggagcaatggccatttgataagaagggaatcaccatggagaaagcagatagcagttct
ccggagatacgagcaaagaagatctttgcctgtggattcagccagaagcaaggcggatgt
ttcgatctgtcgatgttttgcagttttgatagtcgtaactttggttccatggcggatcta
gttagcctggaatgggatatcgaaaactctcggtcgtttgtttctccgcctctcacatgg
aatcgatggaactgggtggatggatccaatccatttccatggcagatcccgaagagcgcc
aaaaggcagcaaaaagataaccacagagacaagcagcagcggcgaagagacagaagcgaa
aaggagttgcagagacggcggcagcgagccgcgatcatggacgccaaactgctgaagacg
accaaatttccgccggagtttgcgaaaaaggtggacatgaccaaagtcaacatcgaggtc
atgaagaaatggattgcagagcggatatctgatatcctggggaacgaggacgacgtcgtt
atcgagctctgcttcaacctcctcgagggctcgcgatttgtacgtggacagacagattct
cgtttgctagtttccctcctccgggttgagtttgatgggctaactatcaatcttaccggt
ttcctggagaaagatacagcgaaattctgcaaggatctatggaacctctgcctcagcgcg
caggatagcccccaaggtgtccccaaagagttgctggaggcgaagaagctggagttgatg
caggaacagagagaatccggcggagagagagagaggatcgtggccgtggcagaagaggcc
gcggtggccctgctcgtggagctgatcggtacgacagcagagattctccctcgcctcatc
gacggagacgaagcccaccggtttaccgagatacacctcgccggggagcagatatctacg
ttcccagcggtggtagaagctatagacgagatgatcatagagggcgccgcccgtcgagac
agccctctacttcgccgtcccggtcaccatcacgctctgtctcgccagttcgggaccgtc
gacgggataggaggtctcccgaaagaaggcggcggcgttcgaccagcagctctcgctcac
cttatagaggtgaccgtgaccgtgaccgtgaccgtggctggaaacgagcccgcagcccga
cccatgatgacgactccaggtccccaagccgctcgccgtccagaagaagacggagaagat
cgagaagcggaagctctatctctccaccccctgctagtaatcgggcttcgagatcccgtc
gtgcatcttcattacgatctccgtcgaggtcaagtagcgagggtgatcggagaagtcggc
gccctcggaggagatcccctttgtaccaacaagggtctagacgtgatgtacctagagctg
atattgctaaagatcgcagaagtcacgaccaccgccggcttagccgcagccgtagccgca
gtcgcagccgcagtcgccatcgaacgcgaagccggagtcgaagccgcggaagataccgcc
gaagacagcggtcgaccagcagcaggtcatcgacgagcagctcacgtagccgcagccgca
gccgcagccgcagtggccggcggaggcatcaatctattgaaagatatgccccagctggac
gcaggtcgcgcaagaacagttctgccccttcaccacctgctcaaaagcgacagagaatag
DBGET
integrated database retrieval system
