Trichophyton verrucosum: TRV_00564
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Entry
TRV_00564 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
tve
Trichophyton verrucosum
Pathway
tve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRV_00564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tve03041
]
TRV_00564
Spliceosome [BR:
tve03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
TRV_00564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
PRP4
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_SCAP
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_Vps41
WD40_like
Beta-prop_DCAF12
Beta-prop_RIG_1st
PROPPIN
Motif
Other DBs
NCBI-GeneID:
9580740
NCBI-ProteinID:
XP_003025248
UniProt:
D4D0G9
LinkDB
All DBs
AA seq
526 aa
AA seq
DB search
MHPARRAYVEEAQELSLIAVDHDYELPSAAAGIAPEKASAILSQFERKRRAAAIAVPTDD
GRVKARLRELGHPITLFGEDSTDRRDRLREVLADLEEQQAAAGEAGAEDVGMGGMEAEEE
DQDQEEEFYTEGSQDLLQARREMARYSIPRAKARVERQKAESTIPLRTHVKHRKAIREKL
GHFELYGSQIAGDRPVSITRFSPNGEIVAAGNWSGGVKLLTVPNLEEKANLRGHTDRIGG
ISWFPGATLPESNVSESSLNIATGGAEGNIRLWSLDKDTSIGTLSGHSDRVCRVEFHPSG
KYLASASFDTTWRLWDVQTNQELLLQEGHSRGVYALGFNTDGSLLASGGLDSIGRIWDLR
TGRTVMILEGHIREIYALDWGIDGHRILSGSGDGWVKCWDLRQVRGTGGVGAHKSVVSDL
RWYKGSDAASLLPTTSGLDQNGDMMDVTPTPTKDQPDQPPQPKKSGTFFVSSGFDKNVNI
FSADDWSLVKSLQGHSGNVLSTDISTDAKWIASCGHDRTVKLWGIE
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgcatcccgcacggcgcgcctatgtggaggaagcgcaggagctctctttaatagccgtg
gaccatgactacgagcttccctccgctgctgcaggaatagctcccgagaaagcttctgcc
atattatctcagttcgaacgaaaacgacgagcagccgctattgctgtacctacagacgat
ggacgagtaaaggctcggttgcgggagttgggccatccaattaccctgtttggtgaagac
tctacggaccgacgtgacagattgagagaagtattagcggacttggaggaacaacaggct
gcggctggtgaagctggtgctgaagatgtcggcatgggagggatggaagcagaggaggaa
gaccaagaccaagaggaagaattctacactgaaggctcacaggatttgctccaggcacgg
agagagatggcaagatattcaatacccagagcaaaggcaagggtagaacggcaaaaagcc
gaatccaccatacctcttcgaacacacgttaagcacagaaaagcaataagggagaaactc
ggccattttgagctttatggctctcagattgctggagaccggcccgtgagcattaccagg
ttttccccaaatggagaaatagtggctgcgggtaattggagtggaggtgtcaagctactt
acagtcccgaatttggaggaaaaggcgaatctacgaggacatacagatcgaattggtggc
atatcatggttcccaggggctacactacccgaatcaaatgtctccgaatcgtctttgaat
attgctacgggaggcgctgaagggaacatcaggctttggtcccttgataaagatacttct
attggaacactttctggacactctgaccgagtatgtcgcgtggaatttcacccatcaggg
aaataccttgcctctgcatcttttgataccacctggcgattgtgggatgtacaaacgaac
caagaacttctcctacaagaaggtcactctcgtggagtttacgcactaggattcaacact
gatggctcacttctggctagcggtggccttgacagtattggacgtatctgggacttacgc
actggtcgaacagttatgatattagagggccatatccgtgagatatatgccttggattgg
ggaatagatggacatcgtattctgtctggatcaggagatggctgggtcaagtgttgggat
ctccggcaagttcgtggtaccggtggagtaggtgcacacaagagcgttgtgtcggatcta
agatggtacaaggggagcgatgctgcctcactcctaccaaccacttcaggacttgaccag
aatggggatatgatggatgtaacacccacaccaacgaaggaccaaccagaccaacctcca
cagcccaaaaaatctggaactttcttcgtttccagtggatttgacaagaatgtcaacatc
tttagtgcggatgactggtcacttgtgaaatcgctgcaaggccactccggaaatgttctc
agcactgatataagtaccgatgcaaagtggatagcaagttgcgggcacgatcgaactgtg
aagttatggggtattgaataa
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integrated database retrieval system