KEGG   Trichophyton verrucosum: TRV_00564
Entry
TRV_00564         CDS       T01615                                 
Name
(RefSeq) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
tve  Trichophyton verrucosum
Pathway
tve03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TRV_00564
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tve03041]
    TRV_00564
Spliceosome [BR:tve03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    TRV_00564
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd PRP4 DSE1_N Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_SCAP NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_EML Beta-prop_TEP1_C PAC11 WDR90_beta-prop_4th Beta-prop_HPS5 ASA1 Beta-prop_WDR41 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_RIG_1st WD40_like
Other DBs
NCBI-GeneID: 9580740
NCBI-ProteinID: XP_003025248
UniProt: D4D0G9
LinkDB
AA seq 526 aa
MHPARRAYVEEAQELSLIAVDHDYELPSAAAGIAPEKASAILSQFERKRRAAAIAVPTDD
GRVKARLRELGHPITLFGEDSTDRRDRLREVLADLEEQQAAAGEAGAEDVGMGGMEAEEE
DQDQEEEFYTEGSQDLLQARREMARYSIPRAKARVERQKAESTIPLRTHVKHRKAIREKL
GHFELYGSQIAGDRPVSITRFSPNGEIVAAGNWSGGVKLLTVPNLEEKANLRGHTDRIGG
ISWFPGATLPESNVSESSLNIATGGAEGNIRLWSLDKDTSIGTLSGHSDRVCRVEFHPSG
KYLASASFDTTWRLWDVQTNQELLLQEGHSRGVYALGFNTDGSLLASGGLDSIGRIWDLR
TGRTVMILEGHIREIYALDWGIDGHRILSGSGDGWVKCWDLRQVRGTGGVGAHKSVVSDL
RWYKGSDAASLLPTTSGLDQNGDMMDVTPTPTKDQPDQPPQPKKSGTFFVSSGFDKNVNI
FSADDWSLVKSLQGHSGNVLSTDISTDAKWIASCGHDRTVKLWGIE
NT seq 1581 nt   +upstreamnt  +downstreamnt
atgcatcccgcacggcgcgcctatgtggaggaagcgcaggagctctctttaatagccgtg
gaccatgactacgagcttccctccgctgctgcaggaatagctcccgagaaagcttctgcc
atattatctcagttcgaacgaaaacgacgagcagccgctattgctgtacctacagacgat
ggacgagtaaaggctcggttgcgggagttgggccatccaattaccctgtttggtgaagac
tctacggaccgacgtgacagattgagagaagtattagcggacttggaggaacaacaggct
gcggctggtgaagctggtgctgaagatgtcggcatgggagggatggaagcagaggaggaa
gaccaagaccaagaggaagaattctacactgaaggctcacaggatttgctccaggcacgg
agagagatggcaagatattcaatacccagagcaaaggcaagggtagaacggcaaaaagcc
gaatccaccatacctcttcgaacacacgttaagcacagaaaagcaataagggagaaactc
ggccattttgagctttatggctctcagattgctggagaccggcccgtgagcattaccagg
ttttccccaaatggagaaatagtggctgcgggtaattggagtggaggtgtcaagctactt
acagtcccgaatttggaggaaaaggcgaatctacgaggacatacagatcgaattggtggc
atatcatggttcccaggggctacactacccgaatcaaatgtctccgaatcgtctttgaat
attgctacgggaggcgctgaagggaacatcaggctttggtcccttgataaagatacttct
attggaacactttctggacactctgaccgagtatgtcgcgtggaatttcacccatcaggg
aaataccttgcctctgcatcttttgataccacctggcgattgtgggatgtacaaacgaac
caagaacttctcctacaagaaggtcactctcgtggagtttacgcactaggattcaacact
gatggctcacttctggctagcggtggccttgacagtattggacgtatctgggacttacgc
actggtcgaacagttatgatattagagggccatatccgtgagatatatgccttggattgg
ggaatagatggacatcgtattctgtctggatcaggagatggctgggtcaagtgttgggat
ctccggcaagttcgtggtaccggtggagtaggtgcacacaagagcgttgtgtcggatcta
agatggtacaaggggagcgatgctgcctcactcctaccaaccacttcaggacttgaccag
aatggggatatgatggatgtaacacccacaccaacgaaggaccaaccagaccaacctcca
cagcccaaaaaatctggaactttcttcgtttccagtggatttgacaagaatgtcaacatc
tttagtgcggatgactggtcacttgtgaaatcgctgcaaggccactccggaaatgttctc
agcactgatataagtaccgatgcaaagtggatagcaagttgcgggcacgatcgaactgtg
aagttatggggtattgaataa

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