Entry |
|
Name |
(RefSeq) RNA lariat debranching enzyme, putative
|
KO |
K18328 | lariat debranching enzyme [EC:3.1.-.-] |
|
Organism |
tve Trichophyton verrucosum
|
Brite |
KEGG Orthology (KO) [BR:tve00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:tve03041]
TRV_00603
03009 Ribosome biogenesis [BR:tve03009]
TRV_00603
Spliceosome [BR:tve03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
TRV_00603
Ribosome biogenesis [BR:tve03009]
Eukaryotic type
90S particles
RNase
TRV_00603
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
AA seq |
684 aa
GHGKLHDIYAAVQASAEARGWNSVDLLIIGGDFQAVRNSNDLTCMAVSNKYREIGDFHEY
YSGARVAPILTIFVGGNHEASNHMFELYYGGWVAPNIYYMGAANLVRYGPLRIMGMSGIW
KGYDYHRPHYERIPYDSDTLRSAYHIREVDVRKLLQIRTQVDIGISHDWPRGIEWAGDYD
HLFRIKEHLMEDSETGKLGNVAAKQVLDRLRPAHWFSAHLHCKYTATLHHQEYQPPQVLI
RFKESEQTLVKPPVPSPPVLAEKANTVSDHPKDISEPKLGPIQEVAQDETAKKNAWRDFH
QVAASTEQDEQEIFMREVAKYHKQVEVGDITSGSDITYQLKWKKVGVDDGTGREVQDIIT
TSIDKEGNKAAESSEVVQVKNTDEINLDMDDGSENDEPKANIPAGAEIEPCEKVANEKAP
EPEPERSEAKRAATNDAKNVDSVPDDIRSQLPASFAKPSPVTSGPKPIVESTLPAEITNT
TTEFLALDKCEGRRHFLHLTEVKPVSKDDGAGNTGPYQLMYDKEWLAITRALHPGFTVGD
KAASVPSNKGDGGYKPDIIAAEEWIEENVVKAGKMVIPYNFIITAPVYDPSVPVSTQEQP
PEYQNPQTEEFCKLIGIENAFAMSDEQRQSQNEALKAANESNKGGIFRLGGHGGRGGRGN
RGGRGRGRGRSGHGGRGGHTRSHH |
NT seq |
2055 nt +upstreamnt +downstreamnt
gggcatggaaaactacatgatatctacgcggctgtccaggcttcagctgaggctcgcgga
tggaatagcgttgacctgcttattattgggggtgactttcaggctgtgagaaactccaat
gaccttacttgcatggcagtttcaaacaagtatagggagattggagacttccatgaatac
tacagcggtgctcgcgttgcccctatcctaaccatctttgtgggaggcaaccatgaggct
agcaaccatatgttcgagctctactatggtggctgggttgctccaaacatctactacatg
ggagcagctaacttggtccgctacggacctctacgcattatgggcatgtccggtatttgg
aagggctatgactatcatcgtccccattatgagagaatcccttacgatagtgacacgcta
cgctcagcttaccacattagagaggttgatgtccgcaaacttctgcagattcgtacacag
gtcgacattggcattagccatgattggcctcgtggcattgaatgggctggagactatgac
catctcttcagaatcaaagaacacctcatggaagattccgagaccggcaagctcggtaat
gttgcagccaagcaggtgcttgacagactcaggccagctcactggttctctgctcacctg
cactgcaagtatactgccactttgcaccaccaggaataccaacccccacaggtacttatc
cgcttcaaggaatctgaacaaaccctcgtcaagcctcctgtgccctctccacctgtcctt
gccgaaaaagcaaataccgtctccgatcatcccaaggacatttctgagccaaagttaggt
ccaatccaggaggttgcacaggatgagaccgcaaagaaaaacgcttggcgtgatttccac
caagttgctgcttctactgagcaagacgagcaggaaatattcatgagagaggttgcaaaa
taccacaagcaagtggaagttggagacatcacttctggtagtgacattacctaccagctg
aagtggaagaaagttggtgttgatgatggaactggtcgtgaggttcaagacattattacg
acttccattgacaaagaaggcaacaaagccgctgagagttccgaagttgtgcaggtcaag
aataccgacgaaatcaatctggacatggatgatgggtctgagaacgatgagcccaaggcc
aatattcctgcaggagctgagattgagccttgcgagaaagttgccaacgaaaaagcacct
gagcctgagcctgagagatccgaggctaagagagcagctaccaatgatgctaagaatgtt
gactccgttcctgatgacattcgtagccagctgccagccagctttgccaagccttcccca
gttacatctgggcctaagccaattgttgaatccactctcccagcggaaattaccaatact
accactgaattccttgcattggacaagtgtgaaggtcgccgtcatttcttacaccttact
gaggttaagcccgtctccaaggacgatggagctggtaatactggcccttaccagctgatg
tacgataaggaatggcttgccatcacccgcgctctgcatccaggattcaccgttggtgac
aaagctgcctccgtcccctctaacaaaggtgatggcgggtataaacctgacatcattgcc
gctgaggagtggatcgaagagaacgttgtcaaggccgggaagatggtcattccatacaac
ttcatcatcactgctcccgtttatgacccttctgttccagttagcacccaggaacagcct
cctgaataccaaaacccacagactgaggagttttgcaaactaattggtattgagaacgca
tttgccatgtctgatgaacaacgtcaatcccagaatgaggctttaaaggcagcaaatgaa
tctaacaaaggaggtatcttccgtctcggtggacacggtggccgtggcggccgtggcaat
cgtggcggtcgcggtcgcggtcgtggcagaagcggacatggtggccgtggcggacatact
cgaagccaccattaa |