KEGG   Trichophyton verrucosum: TRV_00891
Entry
TRV_00891         CDS       T01615                                 
Name
(RefSeq) hypothetical protein
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
tve  Trichophyton verrucosum
Pathway
tve03020  RNA polymerase
tve03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TRV_00891
  09124 Replication and repair
   03420 Nucleotide excision repair
    TRV_00891
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tve03021]
    TRV_00891
   03400 DNA repair and recombination proteins [BR:tve03400]
    TRV_00891
Transcription machinery [BR:tve03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     TRV_00891
  RNA polymerase III system
   RNA polymerase III
     TRV_00891
  RNA polymerase I system
   RNA polymerase I
     TRV_00891
DNA repair and recombination proteins [BR:tve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      TRV_00891
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 9580462
NCBI-ProteinID: XP_003024970
UniProt: D4D1E1
LinkDB
AA seq 194 aa
MAETIRPAKFIRTRNKPPFLKKAPKPDVVALMVLASSLSRLYFSHPYFPADTFKMSDFGG
DDHDDREETGLDYEPAEDFYDDTAVDDYAVDDQQEEGYAVLNGDGQPVTTNGENGDPNAS
SGQGQGKTILQQREKKVANDQRTTTPYMTNMNAPILVDLEGETDPLQIALKELNQKKIPL
IIRRYLPDGWLVLP
NT seq 585 nt   +upstreamnt  +downstreamnt
atggcagagaccatacgcccagctaagttcatcagaaccagaaataagcctcctttcctc
aagaaggcccccaagccggacgttgtagcgttgatggttttggcttcttcgctttctcgt
ttgtacttctcgcatccatattttcctgctgataccttcaagatgtctgactttggcgga
gatgaccatgacgaccgcgaggagactggcctcgactatgagccagctgaagacttctat
gatgatactgcggttgatgactatgcggtggatgaccagcaagaagaaggttatgcggtg
ctgaacggtgatggacagcctgtcactaccaacggagagaacggcgacccaaatgcctcc
tctggccagggacaagggaaaacaatactgcagcaacgtgagaagaaagttgccaatgat
cagcggacaacaacaccatacatgaccaacatgaatgctcctatccttgtcgatttggag
ggcgagaccgatccactccaaattgctcttaaagagctcaatcagaagaaaatcccacta
attatcaggaggtatcttccagacggatggttagtacttccatag

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