Trichophyton verrucosum: TRV_00896
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Entry
TRV_00896 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K14284
nuclear RNA export factor
Organism
tve
Trichophyton verrucosum
Pathway
tve03008
Ribosome biogenesis in eukaryotes
tve03013
Nucleocytoplasmic transport
tve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRV_00896
03015 mRNA surveillance pathway
TRV_00896
03008 Ribosome biogenesis in eukaryotes
TRV_00896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tve03019
]
TRV_00896
03009 Ribosome biogenesis [BR:
tve03009
]
TRV_00896
Messenger RNA biogenesis [BR:
tve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TRV_00896
mRNA cycle factors
Stress granule specific factors
TRV_00896
Ribosome biogenesis [BR:
tve03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
TRV_00896
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
TAP_C
LRR_NXF1-5
LRR_9
LRR_4
LRR_8
NTF2
RRM_9
DUF908
DHU1_N
Motif
Other DBs
NCBI-GeneID:
9580467
NCBI-ProteinID:
XP_003024975
UniProt:
D4D1E6
LinkDB
All DBs
AA seq
785 aa
AA seq
DB search
MLQVSGGRMNSSSNRSRGTRGRTGGTDRGGIRKRGATPRVDRDGDMDMAASGSSAGKGRI
RSSRGVAPGRSSRRPGEKEKTIDALQKAIFSSSSSQANIRHGRGITDGALRRNLTQIKVS
GWKNSKAASNPDGGVVSLVAFLEKKSAPPDQNATAPGRFKITKTFYECYRVTAKKIGFQV
RPEQVDGFLRLNGFSFAGAPLTVELLDSVAMADTPSQSSQGPSQAAIDTKAKMTAFLAKR
YSEPGKLLDLSKLGTDPDLVEMGMFNSVSTESKFFPALMKVCELTFDSAAKRKAAVVSVS
LAHNQLPNLTAVTSLAQTFPDIRNLDLSHNQFKDISSLSSWRWKFRSLDFLDLTGNPVCA
EPNFKETMIKWYPQLRTLNNAAVRTAEEIAAQKKTPIPVMGPSFQDEGQIAENFVKAFFT
GFDNNRNDLLNGIYDAKSIFSYNVNTVAPRAAQTESTPPWDSYIRKSRNLVKISHLPARV
SRSFIGTDSIREIWNTFPQTKHPEILSNPKEWLIECHPIPGLPDINNQSVTGVGGLLITV
HGKFEEIYPNTGSKSQTRSFDRTFVLGPGNGLGGLRVSNDMLCLRVFGDCTAWIPEHEQA
AAEPVTQAPPVTVIPAQPAAVPQLGTQHPEAKPGYGTPQPGKSEDELKKEQLILEISFKT
KMTLQFSEMALSGNSWDMNLALKNFEELKEETKRKEGEREKKPSAFYSLFLLASIYYIHR
RFPREILFSQHFQRLNSGVTFEMNEEIGVSCFRDCHYIFTAMSLLEYISFDKGLIGLGVQ
EGYAG
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaggtctcaggtggaaggatgaatagctccagcaaccgcagtagaggcacccga
ggcagaacgggaggaacagaccgcggtggcatccgaaaacgaggcgccactccccgggta
gatcgagatggagacatggatatggctgcctctggttcaagcgctggaaagggtcggata
agaagctctcgcggagtcgctccgggaagatcatcgagaagaccaggagagaaagaaaag
acgattgatgctctccaaaaggctatattcagcagttcttcctcccaggccaatatcagg
cacggccgtggaattacagatggagccctgaggcggaatctgacacagataaaagtgagt
ggttggaagaatagcaaagcggcttcgaatcccgacggtggcgttgtcagtcttgttgca
tttttggagaagaaatctgcgcccccggaccagaacgctacggcccctggacgattcaag
attactaagacattctacgaatgctatcgagttactgcaaagaagatcggtttccaagtt
cgacccgaacaggtggatggatttttacgattgaatggattttcctttgccggagccccc
ctcacggtggagctgcttgatagcgtagctatggcagacaccccatcacagtcaagccaa
gggccatctcaagctgcgatcgataccaaggctaagatgactgctttcctcgcaaagaga
tattcggagccaggaaaactccttgatctatcaaaattgggtacggatcccgatctggtg
gagatgggcatgtttaacagtgtgtcaacggaatcaaaattcttcccggcccttatgaaa
gtgtgcgagcttactttcgactctgctgccaaaaggaaggctgcagtcgtgagtgtcagc
ttggcgcataatcaactaccaaacctcactgctgtcacttctcttgcacaaaccttcccc
gatatcagaaacctcgatttgtcgcataaccagttcaaggatatctcgagtctaagcagc
tggagatggaaattccgcagcctcgactttctagatcttactggaaacccagtatgcgca
gaaccaaatttcaaggaaaccatgataaaatggtatcctcagctccggacattgaacaat
gcagcagttagaacagctgaagaaattgcggctcaaaagaagacccctatccccgtcatg
ggcccgagctttcaggacgagggccagattgcggaaaattttgtcaaagctttctttact
ggattcgacaacaaccgaaacgatcttctcaatggcatatatgacgcaaaatccatattt
tcgtacaacgtcaacactgtagccccacgagcggcacaaacggaatcaacgcctccatgg
gattcgtacatccggaaaagcagaaatctcgtgaaaatcagtcatctccctgcccgcgta
tcacgtagctttattggtactgacagcatccgcgaaatatggaatacgttcccacaaaca
aaacacccggaaattctttccaaccccaaagaatggttgatagaatgccaccctattcct
ggccttcctgatatcaacaatcaaagtgtgactggtgttggtggccttttgatcacagtc
catggaaaatttgaggagatatatcccaataccggaagcaaatcccaaacccgcagtttt
gaccgaacatttgtccttgggcctggaaatggtctaggaggactccgggttagcaacgac
atgctttgccttcgagtgtttggagattgtactgcctggattccagagcatgaacaagct
gcagctgagcctgtaacccaagcacctcctgtaaccgtcatacccgcccagcctgcggca
gttccgcaattaggaactcaacatccagaggcaaaaccaggctacggaacaccccagcct
gggaagtcggaggacgagcttaaaaaagaacagcttatactggagataagctttaaaacg
aagatgacgttgcagttttccgaaatggctcttagtggtaacagctgggatatgaatttg
gcgttaaagaactttgaagagctcaaggaagaaacaaaaaggaaagagggagagagagaa
aaaaaaccgtcagcgttttacagcctttttttattagcatccatatactatattcatcgt
cgttttccccgggagatccttttctcgcaacatttccagagactcaactctggagttacc
tttgaaatgaacgaagaaattggcgtatcctgctttagggattgccattatatctttacc
gctatgtccttgctcgaatatatatccttcgataaaggcttgattggccttggagtacag
gaaggctatgcaggctaa
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integrated database retrieval system
