KEGG   Trichophyton verrucosum: TRV_01585
Entry
TRV_01585         CDS       T01615                                 
Name
(RefSeq) replication factor C subunit
  KO
K10755  replication factor C subunit 2/4
Organism
tve  Trichophyton verrucosum
Pathway
tve03030  DNA replication
tve03410  Base excision repair
tve03420  Nucleotide excision repair
tve03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tve00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TRV_01585
   03410 Base excision repair
    TRV_01585
   03420 Nucleotide excision repair
    TRV_01585
   03430 Mismatch repair
    TRV_01585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tve03032]
    TRV_01585
   03036 Chromosome and associated proteins [BR:tve03036]
    TRV_01585
   03400 DNA repair and recombination proteins [BR:tve03400]
    TRV_01585
DNA replication proteins [BR:tve03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    TRV_01585
  DNA Replication Termination Factors
   ELG1-RFC complex
    TRV_01585
Chromosome and associated proteins [BR:tve03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    TRV_01585
DNA repair and recombination proteins [BR:tve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     TRV_01585
  Check point factors
   HRAD17(Rad24)-RFC complex
    TRV_01585
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_assoc_2 SLFN-g3_helicase AAA_22 AAA_24 UBA_HYPK AAA_19 AAA_11
Other DBs
NCBI-GeneID: 9579273
NCBI-ProteinID: XP_003024235
UniProt: D4D3C6
LinkDB
AA seq 336 aa
MLFYGSPGTGKTSTILAMSKSLFGPALVRSRVLELNASDERGINIVREKIKDFARMHLSQ
PPADPAYRSQYPCPPFKIIILDEADSMTHDAQSALRRTMEKYSRITRFCLVCNYVTRIID
PVASRCSKFRFKVLDGSAAQSRLVEIARMEKLDLEDNVVETLLRCSDGDLRKAITFMQSS
ARLARYGSGKKKDSSDKEMELDDVKPRITVRSIEEVSGLVPETVMQRVVAALRPSKRASK
YEEISSLVADLVADGWSASQVLSQVYLLLPQPLRNVLLTSFKTYQAVLQDESISDVQKNQ
ILKVCSEFDKRLVDGADEHLSTLDFMLQISGIIQST
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgcttttctatggatctccaggtactggaaagacgtcaaccatccttgcgatgtccaaa
tctctttttggacctgctcttgtccgctcccgagtccttgagcttaacgcttctgacgag
cgaggtataaacattgttcgtgaaaagattaaagattttgctcgaatgcacctatcccaa
cccccggccgatcctgcctatcgctcacaatatccgtgtccaccgttcaaaatcatcatt
cttgatgaagcagatagcatgacccatgacgcccagtccgctctccgcagaactatggag
aaatacagccggattacgcgtttctgcctcgtttgcaattatgtcactcgaataattgac
ccagtggcgagtaggtgcagcaaatttcggttcaaggtactagacggttctgctgcccaa
agccggcttgtagagattgcaagaatggagaaactagacctggaggataatgtcgttgag
accctacttcggtgcagtgatggtgacctgcgaaaggctataacatttatgcagagctct
gcaaggctagctcgctatggctctgggaaaaagaaggattcgtccgataaagagatggaa
ctcgatgatgtcaaacccaggattactgtcaggagcattgaagaagtatctggactagtt
ccagaaactgttatgcaacgtgttgtcgcagctcttcgcccaagcaagcgtgcttcgaaa
tacgaagaaatctcaagcctcgtagctgacctcgtggccgacggatggagtgcctctcaa
gtcctgtcacaggtatatctcttactcccacaacctttgaggaatgttctactgacctca
ttcaagacataccaagcagtacttcaagatgaatccatttcagatgtacagaagaaccaa
atattgaaggtctgctctgaatttgataaacgactagtagatggcgcagatgagcacctc
tcaactctggatttcatgctacaaatatccggcataatacaatctacttag

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