Trichophyton verrucosum: TRV_01902
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Entry
TRV_01902 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K18748
protein SSD1
Organism
tve
Trichophyton verrucosum
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tve03019
]
TRV_01902
Messenger RNA biogenesis [BR:
tve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
TRV_01902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
Dis3l2_C_term
OB_Dis3
CSD2
Rrp44_CSD1
DUF4667
DUF5774
Motif
Other DBs
NCBI-GeneID:
9582653
NCBI-ProteinID:
XP_003023960
UniProt:
D4D487
LinkDB
All DBs
AA seq
1417 aa
AA seq
DB search
MDSQGSQGNSGPPRANGRPIHIGHRRSPSEMTPLIMEQLALQQQIEVLQQHQQQIAAQQQ
QNQQFLNIGMIPQQQMQQMQPLAYPQMQGQGVMPVGFQFPQMQGQQQLGVPGQSSHRRNQ
SALPNVGMGPPPAPSSGASGSQYGENAQSRGGQGRENNNNTNNSNNNNNSQSRRGAVPAG
GSHHRRHSLALPEARRAAELAQQRQTAGAFKFPIPGGAGASPSSASQGQGQGQGDANDDK
PAEVAGPAVPASSPLAAGLGVQRSGNIRNAHLRSQSMAVGGARQYSGRNNPSFQFPQGGE
SSGSPGPDAGRRTSHASHGRSGSRNFDSNWRQQGGAPNTASSGSGNQDPRASLGGLSPQP
QQSGNGFQPGHRSRGSVSSMSAFQFPNTQQLFQLPQGQVVLPQMYQGQQQQLLHNNALQL
AQLQALQSGQLGSLPQNLQLVGQQQASQPQQQSQTQAQQNRKTLFTPYLAQTMLPDLFEE
GKLVTGILRVNKKNRSDAYVTCSDLDADIFICGSKDRNRALEGDLVAVELLDVDEVWSQK
REKEEKKKRKDIDTRSGSTAGLDRGGRSDSNATADIQQIGPDGSIRRRGSLRQRPTQKKN
DDVEVEGQSLLLVEEDEISDEHKPLYAGHIIAVVDRAAHQIFAGSLGLLRPSSQATKEKQ
EAERQARDGYSGRPQHERHQERPKIVWFKPTDKRVPLIAIPTEQAPRDFVDRHADYANTI
FVATVKRWPITSLHPFGTLCEQLGPMGNLKVEIDALLRDNNFAADDFPASVLDKVGFEDW
SIGQEEPQSLASRTDFREYNVFTVDPNGGKAMDNAFHIRRLDDKTVEIGIHVADVSRFVD
PSGAVEREAKKRVSSAFLMNRIVDMLPPHLAQKVMALLPGNDRLAVSVLLQVVVESGKIV
DQPWIGKSIINSKGKLSYAELDKIIKGTGQVEVNGVSVKDIKMLVDVSNKLRDARLGHRA
EKLRPLRLLYQLDDENVPVQQNIFNSSPGREAIDELTYMANHYVARKIFEAFPEHALLRR
QASPNFRRLGTFVERMSKLGYNIDPTSSGTLQNSLFKVENDDVRKSMETLLLKTLSRGKY
YTPPTVREEHRSHYMLNLSLYTHFTNPSRRYADIVVHRQLEAALAGTTEWQDELDYKALN
YLNSRKDSAQNAQEQSVHFEACHAMERKRKEIDGDLIAEGIVLCVYESAFDVLIPEYGCE
KRVHCDQLPLKKAEFRKDDRVLELYWEKGVPSSTYIPEDERPKSTLSGRAASQAAAAREA
EEARKREQEREEAQRISTETNTVSPNDVDALFDDDEDALTDSFAGVSLNSPDRSTQSMPP
SPRNGPAHPPHRTQSDPRIATTAGETTNDEDAEGGENAKNTQNGEDGEDGEIVELSPKEK
YGDLFELREEDGEYIQDVRELTRVPIILKIDLSKSPP
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atggattcccagggttcccagggcaattctggccctcccagggcgaatggccgccccatt
cacattggccatcgacgcagcccctcggaaatgaccccattaattatggaacaacttgct
ctacaacagcaaattgaagttctccagcaacaccagcagcaaattgccgcccagcaacaa
caaaatcagcagttcttgaatatcggcatgataccccagcaacagatgcagcagatgcag
ccccttgcctatccccaaatgcaaggccaaggtgtcatgcccgtaggttttcaattccct
caaatgcaaggccaacagcagcttggagtccccggccagtcctctcatcgccgtaatcaa
tcggccctgccaaatgttggcatgggaccaccgcccgccccatcttccggggcgtctggt
tctcagtacggtgaaaacgcacagagccgtggaggccaaggccgcgaaaacaacaacaat
accaacaatagcaataataacaataacagccaatctcgcaggggggctgttcctgccgga
ggaagccaccatcgtcgacactcgctcgctttacccgaagccagaagggccgcggaattg
gctcagcaaaggcagaccgccggcgccttcaagttccccatcccaggaggtgctggagct
tcaccttcttctgcaagtcaaggccagggccagggtcagggtgacgccaatgatgacaag
ccagcagaagtcgctggccccgcagtaccggcatcttcccctctggcagcaggacttggt
gtccaacgctctggaaatatccgtaatgctcatctacgcagccagtccatggctgtaggt
ggtgctcgccagtactccgggagaaataacccctcgttccagttcccccaaggcggtgaa
tcttccggctcacctggacctgatgctggacgaagaaccagtcacgccagccatggacgc
agcggctcaagaaactttgacagcaactggcgccagcagggaggtgcaccaaacactgcc
agcagtggcagtggcaaccaggacccccgagccagccttggtggcctctctccccagcca
cagcaaagtggtaacggcttccagccaggtcaccgttccaggggatctgttagctccatg
tccgctttccaattccccaatacccagcagcttttccagcttcctcagggtcaagttgtc
ttgcctcagatgtaccagggccaacaacagcagttacttcacaataatgcccttcaactg
gcacaactccaagccttgcagagcggacagctcggttccttgccacagaacctgcaattg
gttggtcagcagcaagcctctcagccacaacagcaatcgcaaacgcaggcacagcagaat
cgcaaaactctgttcactccataccttgctcagacaatgcttcctgatctcttcgaggag
ggcaagctggtcactggcatccttcgcgtaaacaagaaaaaccgttcagacgcatatgtt
acctgttctgatcttgacgctgatatcttcatctgcggtagcaaggacagaaatcgagct
ctcgagggcgatcttgttgccgtcgagctccttgatgttgatgaagtctggagccagaag
cgcgaaaaggaagaaaagaagaagcgcaaggatattgataccagaagcggaagcacagct
ggtcttgaccgaggtggccgctccgactccaatgctactgctgacatccagcaaattggc
cctgacggtagcattcgccgcagaggtagtcttcgccagcgtcccacccagaagaagaat
gatgacgtcgaagtcgaaggtcagagcttgcttcttgtcgaagaagatgagatcagcgat
gagcacaaacccttgtacgcaggtcatatcatcgctgtcgttgaccgtgcggcccaccag
atcttcgctggctccttgggactccttcgacccagcagccaggcaaccaaggaaaagcag
gaagcagaaagacaggccagagacggctactctggacgtcctcagcatgagcgccaccag
gaacgaccaaagattgtttggttcaagcccaccgacaagcgtgtacctttgatcgctatt
ccaactgaacaggcacctcgtgacttcgttgaccgtcacgcagattatgcaaacactatt
ttcgttgctactgtcaagcgatggcccatcacctcgctccatccatttggaaccctttgc
gagcagcttggtccaatgggcaacctgaaggttgagattgatgccttgcttagagacaac
aactttgctgccgatgatttcccggcctctgttcttgacaaggttggattcgaagattgg
tccatcggacaagaggaaccccagtcccttgcttcccgcacggatttccgtgaatacaac
gttttcactgttgatcccaatggaggcaaggcaatggacaatgccttccatattagacga
cttgacgacaagacagtagagattggtatccatgttgctgatgtctctcgctttgttgat
cctagcggtgcggtcgaacgcgaagctaagaagcgtgtgtccagcgcctttttgatgaat
cgcattgtggacatgctcccgccacacttggcccagaaagtcatggctctcttgcctgga
aacgatcgcctcgctgtgagcgtcctgctccaagttgttgttgagtctggaaagattgtc
gatcagccctggattggcaagagtattatcaatagcaaaggaaagctaagttatgccgag
ctcgataagatcatcaaggggactgggcaagttgaagtcaatggtgtctccgtcaaggac
atcaagatgttggttgatgtctctaacaaacttcgcgatgctcgtcttggacaccgtgcg
gagaaattgcgccctctccgcctcttataccagcttgatgacgagaatgttcctgtccag
cagaacatatttaattcctccccaggtcgtgaagctattgacgagctcacttacatggct
aatcattatgttgcgaggaagatctttgaggccttccctgagcatgcccttctccgccga
caggcttcgcccaactttagacgcctaggcacctttgtcgagcgcatgtccaaacttggg
tacaacattgatcctactagcagtggcacactgcagaacagtcttttcaaggtggaaaat
gatgacgtgcgaaagagtatggaaacgctcttgctcaaaactttgagccgtggaaaatat
tacacccctccaactgtccgggaagagcaccgttctcactacatgctcaacttatcactt
tacactcacttcactaacccatcccgtcgctatgccgacattgttgtccacagacagcta
gaggcagcattggcaggaacaacagagtggcaagatgaattagactacaaggcacttaac
taccttaacagcaggaaagactctgctcaaaatgcacaggagcagagtgtgcactttgaa
gcgtgccacgccatggagaggaagagaaaagaaattgatggcgacctcattgccgaggga
atcgttctctgcgtatacgagtctgcctttgacgttttgattcccgagtatggctgtgag
aagcgtgttcactgtgaccaactccctcttaagaaggcagagttccgcaaggatgaccgc
gtcctagagttgtactgggagaagggcgttccgtcctctacctacatccccgaggatgag
cgtcccaagtcaactctcagcggacgtgccgctagccaggctgctgctgcccgtgaagcg
gaggaagctcgaaagagagaacaggagagggaagaagcccagcgaatcagcaccgagacc
aacactgtctctccaaatgatgttgatgctttgtttgacgatgatgaggatgccctcact
gactccttcgccggggtatctctcaactctccagaccgttccacacagagcatgccacca
tctccacgaaatggtcctgcacacccacctcaccgtactcaatccgaccccagaattgca
accactgcgggcgagactactaatgatgaagatgccgagggtggcgaaaatgctaagaat
acccagaatggcgaggacggcgaggatggtgaaattgtcgagttgagtccaaaagagaaa
tatggcgatcttttcgaattgcgcgaagaggacggcgagtatatccaggatgtcagggaa
ctgacccgcgttccaatcattctcaagatcgatctcagcaagagcccaccgtaa
DBGET
integrated database retrieval system
