Trichophyton verrucosum: TRV_02049
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Entry
TRV_02049 CDS
T01615
Name
(RefSeq) DNA lyase Apn2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
tve
Trichophyton verrucosum
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tve03400
]
TRV_02049
Enzymes [BR:
tve01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
TRV_02049
DNA repair and recombination proteins [BR:
tve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
TRV_02049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
9582465
NCBI-ProteinID:
XP_003023853
UniProt:
D4D4N3
LinkDB
All DBs
AA seq
588 aa
AA seq
DB search
MFDILEADIVVFQEAKIQRKDLQDDMVLVSGWDCYFSLPRQKKGIYVFSKCAAIRAEEGV
TGALCPPSSRTPFRQLSASEQIGGYPSIEQMEELSEVDPITVDSEGRCLILEFPAFVLIG
VYCPADRDETRDDFRLGFFNLLEVRVRNLVKMGKRVILAGDLNTCAGPIDSAPALERIRK
GTETEEEYLSYPARRIFNRLVRPVGSTGDTHDTESPPVLRDLCREFHPSRTGMYTCWNQK
VNARPGNYGSRIDYILCSDNIRSWFVESNIQEGLIVCVKFGLISPSFNNLLIPNEQGSDH
CPVYASIGDRVPFDGKDVHILDIMNPKGTFDDGVEQPRSNKITPLALSGRLIPEFDRRRN
IKDMFRNHSLSRNNSEVKMSTTTDTLAGSEIPGPASQTKSAQENKTARVTMNHAPKRSHS
TGVQAPPSKRLKPKGRPSGARSNGQQTLVGFFKSERTSRAVSEENATASSDSPQEAPAEV
KITPASELASTAQNNDSVPTAVTTSPDNSVVPSCSPTESWSKVFTRKPVPKCEGHHEDCI
SLVTKKPGINCGRSFWICPRPLGPSGDKESGTPWRCPTFIWSSDWRSS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatatcctggaggcagatattgtggttttccaggaagcaaagatccaacggaaa
gacttgcaagatgacatggttcttgtgtcaggctgggactgctattttagtctcccaagg
caaaagaaaggtatatacgttttttcgaaatgtgctgctatccgtgccgaagaaggcgta
actggcgcactttgtccaccaagctccagaaccccctttcgccagttatctgcttctgag
cagattggcggctatccctctattgaacagatggaggagttatccgaagtagaccctatt
actgtcgattctgaagggcgatgtttgatcctcgaattccctgctttcgtgttgatagga
gtttactgcccggcggatcgagacgaaacccgagacgattttaggcttggtttttttaat
ttacttgaagtccgagtgaggaaccttgtcaagatgggaaagcgggtcattttggcaggt
gatcttaatacctgtgccggccccattgactcagctccagctctagaaaggattagaaaa
ggcactgaaactgaagaagagtacctatcttatcctgctagacgcattttcaataggctg
gtgcggcctgtgggctcaaccggggatacacatgataccgagtcaccccctgttctgcga
gacctctgtagggaatttcaccccagccggactggcatgtatacatgctggaaccaaaag
gtaaatgctcgaccaggcaactatggatccaggatcgattatattctgtgtagtgacaat
atcaggtcctggtttgttgagtctaacattcaagaggggcttattgtatgtgtcaaattt
ggacttatttccccatcgttcaacaacttactaatccctaacgaacagggctcggatcat
tgtcctgtttatgcatctataggcgatagggtgccctttgacgggaaggatgttcatatt
ttggacatcatgaatcccaagggaacattcgacgacggggtagaacaacctcgctctaac
aagataacccccttagcactatcaggaagattgataccagagtttgaccgccgaaggaat
atcaaggatatgttccgaaatcattccctgtctcggaacaatagcgaagtaaagatgtca
acgacaactgatactctggctgggtcggaaattcctggaccggcctcgcagaccaagagt
gcacaagaaaacaagactgcacgagtgacaatgaatcatgctcccaagcgatcacacagc
acaggagttcaggcccctccatctaagagactaaagccaaagggccgaccatctggcgct
cgaagcaatggtcaacaaactcttgttggatttttcaagtccgaaaggaccagtcgtgcc
gtcagcgaggagaatgccacggcttctagtgactcgccacaggaagccccagctgaagtc
aaaataactcccgccagtgagttggcatctacggcgcagaacaatgattcagttccaact
gcagtgacgacctctcccgacaattcagttgttccctcatgtagcccgacggaatcgtgg
tcaaaggtttttacaaggaagccagtgccaaagtgtgagggccaccatgaggattgcatc
tctcttgtcaccaaaaagccaggaataaattgtggacgatcattttggatatgtccgagg
ccgcttggcccgagtggtgataaagagtcgggaactccatggcgttgtccaactttcatt
tggagcagtgattggaggtcaagctga
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