Trichophyton verrucosum: TRV_02226
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Entry
TRV_02226 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
tve
Trichophyton verrucosum
Pathway
tve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRV_02226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tve03019
]
TRV_02226
Messenger RNA biogenesis [BR:
tve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TRV_02226
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TRV_02226
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
9582197
NCBI-ProteinID:
XP_003023651
UniProt:
D4D556
LinkDB
All DBs
AA seq
493 aa
AA seq
DB search
MRADTKAGHSGRHYKAKPVLTLDLASLSEFPSLSSGPQNTTPTPGQAIWGNAGQRSIQQS
HGQRQAQGSVPPQAPSRESQLQAQQGQSQGQAQGHDDQFPSTTQFVTQLDDFRNGVQAMG
QMSGNNQPQAGSVDDFPPLSKQSEQGGAIGNYAWSMGFTGFSAQTRSSLGNQQDSSRIAS
PAAAGPSGTPGPRLPAGQNQNGIIGQDHEVNASYWLTASPNHQNQQDNAQAQAQAQAQAQ
ASMMSQRGMDPMQQPQQQQNPAQMQSSRQQQQPPQPSQAQAENEAHDPSRAGQTAEQASL
SQMSEHDRFGLAGLLRMIHSDSPDVASLAIGQDLMSLGLDLNQQEPLHQTFASPFISSNV
SIPLRPDFTLPACYNVANVQPLQNRIPSFSDETLFYIFYSMPRDIMQELVAEELMGRKWR
YHKIERAWLTRDDTYPNPVEVERGISERGVYLWWDTNTWKKVRREFILRYADLDNRLDPG
RNLVRGMPFPQAT
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagggcagataccaaagctggccattccggccgccactacaaggcaaagcctgtgctg
actctcgacctcgcgtctctcagcgaattcccttccctctctagcggtccgcagaacacc
acaccaacccctggacaggccatctggggcaacgcaggccaacgttcaatccagcagagt
catgggcagagacaagcacaaggttccgtccctcctcaagctccctcacgagaatcacag
ctccaagcccaacaggggcaatctcagggtcaagctcagggccatgatgaccagttcccc
tcaacaacgcagtttgtcacccagcttgatgatttccgtaacggtgtccaggccatgggc
cagatgtccggcaacaaccagccgcaagccggcagtgtcgatgacttccctcctctgagc
aaacagtctgagcaaggaggggccattggcaactatgcctggtctatggggttcactggc
ttctctgcccagacgcgttcgtctcttggaaaccagcaagattccagtagaatcgcatct
cctgcagctgcaggcccgtctggcacaccaggaccgcggctaccagctggccagaaccag
aacgggataattggacaagatcacgaggtgaacgcgtcctattggctaaccgcatcgcca
aaccaccaaaaccaacaggacaacgctcaagcccaggctcaagctcaagctcaagctcaa
gcatccatgatgagccagcgcggcatggatccgatgcagcagccgcagcagcagcagaac
ccagcccagatgcagtcctctcgccagcaacagcagccaccgcagccatcacaggcgcag
gctgagaacgaggcgcatgatccctcacgagccggccagacagccgagcaagcctcgctc
tcgcagatgagcgaacacgatcggttcggcctagccgggcttctacgcatgatccatagt
gacagcccagacgttgcgagccttgctatcggccaagatctgatgagccttggactggat
ctgaaccagcaggaaccactgcatcaaacatttgcatcgccatttatctcatctaatgtg
tccattccactacggccagactttactctgcctgcatgctacaatgtagccaatgtccag
ccactgcagaaccgtatacccagcttcagcgatgagactctgttctacatattctacagc
atgccgcgtgatatcatgcaggagctagttgcagaggagctcatgggcagaaagtggcgt
taccacaagatcgaacgcgcttggctgacgcgcgatgacacttacccgaaccccgttgag
gttgagagaggtatcagcgagcgtggcgtctacctgtggtgggataccaacacctggaag
aaagtccgacgtgaattcattcttcgctacgccgatttggacaaccgtctcgacccaggc
agaaaccttgtccgaggaatgcccttcccccaagccacctaa
DBGET
integrated database retrieval system
