Trichophyton verrucosum: TRV_02684
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Entry
TRV_02684 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K12880
THO complex subunit 3
Organism
tve
Trichophyton verrucosum
Pathway
tve03013
Nucleocytoplasmic transport
tve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRV_02684
09122 Translation
03013 Nucleocytoplasmic transport
TRV_02684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tve03019
]
TRV_02684
03041 Spliceosome [BR:
tve03041
]
TRV_02684
Messenger RNA biogenesis [BR:
tve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
TRV_02684
Spliceosome [BR:
tve03041
]
Complex C
Other components
EJC/TREX
TRV_02684
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
TRV_02684
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Cytochrom_D1
DPPIV_N
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
9583182
NCBI-ProteinID:
XP_003023162
UniProt:
D4D6F9
LinkDB
All DBs
AA seq
374 aa
AA seq
DB search
MSLIFVEIEETAKPRASFASKSAKHHDIKTIPSASTEERRGLNLKLLTCRQLLLIYIRTL
AWNPTGTLIATGSVDRTLRIWNPERPDVRYSTDLRGHTSGIEQIAFNPVKESELASCSKD
GTVRFWDVRAKNCVGRVDVGGEAFSLAWSPDGSVLLAGRMDDTLVPISVEPVAMSTNPAP
NAPKAPSTYKALSHHKQPIRTNGIAFSHSFDPNLFLTTGDGTVKIESYPSFDTLHTLNAH
TAACLCVSLAPTARYLAIGGGDSLISLWDTTNWVCQRTVSSSGGGAVRGISWSWDGRFIV
GACDETDCGGTGLEIFHAETGDSVYTIPTGNPNVGVPAVAWHPSRYCLAYSLYAEGIGSG
NNGLRIVGAGAGDF
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgatcttcgttgaaattgaagagactgccaagccgagagcttcttttgcttca
aaaagcgccaaacaccacgatataaaaaccatcccaagcgcttcaaccgaagagcggcga
gggctcaatttgaagctcctaacatgccgccagcttcttctaatctacatccgtactttg
gcatggaacccaacgggaacgttgatagcaactgggtctgttgatcgaacactgcgcatc
tggaacccggaacgacctgacgtgagatattcgaccgatttgcgcgggcacacttccggc
attgaacagatagcattcaaccccgtgaaggaatctgagctcgccagctgctcaaaggat
ggaactgtccgcttttgggatgtgcgcgcaaagaactgcgtcggccgtgtcgatgttgga
ggggaggccttttccctcgcatggtcccccgatggaagcgtactgctggctgggagaatg
gatgacacattagttcctatatctgtcgaaccagtagccatgtctaccaatcctgcaccc
aatgcgccgaaagcgccatcaacctacaaagcattgtctcaccataaacaacccatccgt
acgaatgggattgcattttcacactctttcgatccaaaccttttcctcaccacaggggat
ggaactgtcaaaatagaatcgtacccatctttcgacacactacatacgctcaatgcccat
acagccgcttgtctttgtgtctcgctcgctccaactgcgaggtatctagccattggcgga
ggagattcactcatttctctctgggatacaacgaattgggtatgccagcgcactgtttcg
agtagtggtggtggagccgttcgcggtattagctggagttgggacggacggtttatagtg
ggcgcctgtgacgaaacagactgcggaggcacaggtctggaaatattccatgctgagact
ggagatagtgtatacactataccgacgggcaatcccaacgttggggtccctgccgtagcc
tggcacccatcccgttattgtcttgcatattctctctatgcagaaggtattgggagtggc
aataacggcctacgcatcgtaggtgccggtgccggtgacttttga
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