KEGG   Trichophyton verrucosum: TRV_02684
Entry
TRV_02684         CDS       T01615                                 
Name
(RefSeq) hypothetical protein
  KO
K12880  THO complex subunit 3
Organism
tve  Trichophyton verrucosum
Pathway
tve03013  Nucleocytoplasmic transport
tve03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TRV_02684
  09122 Translation
   03013 Nucleocytoplasmic transport
    TRV_02684
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tve03019]
    TRV_02684
   03041 Spliceosome [BR:tve03041]
    TRV_02684
Messenger RNA biogenesis [BR:tve03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     TRV_02684
Spliceosome [BR:tve03041]
 Complex C
  Other components
   EJC/TREX
    TRV_02684
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    TRV_02684
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 Cytochrom_D1 DPPIV_N PALB2_WD40
Other DBs
NCBI-GeneID: 9583182
NCBI-ProteinID: XP_003023162
UniProt: D4D6F9
LinkDB
AA seq 374 aa
MSLIFVEIEETAKPRASFASKSAKHHDIKTIPSASTEERRGLNLKLLTCRQLLLIYIRTL
AWNPTGTLIATGSVDRTLRIWNPERPDVRYSTDLRGHTSGIEQIAFNPVKESELASCSKD
GTVRFWDVRAKNCVGRVDVGGEAFSLAWSPDGSVLLAGRMDDTLVPISVEPVAMSTNPAP
NAPKAPSTYKALSHHKQPIRTNGIAFSHSFDPNLFLTTGDGTVKIESYPSFDTLHTLNAH
TAACLCVSLAPTARYLAIGGGDSLISLWDTTNWVCQRTVSSSGGGAVRGISWSWDGRFIV
GACDETDCGGTGLEIFHAETGDSVYTIPTGNPNVGVPAVAWHPSRYCLAYSLYAEGIGSG
NNGLRIVGAGAGDF
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgtcattgatcttcgttgaaattgaagagactgccaagccgagagcttcttttgcttca
aaaagcgccaaacaccacgatataaaaaccatcccaagcgcttcaaccgaagagcggcga
gggctcaatttgaagctcctaacatgccgccagcttcttctaatctacatccgtactttg
gcatggaacccaacgggaacgttgatagcaactgggtctgttgatcgaacactgcgcatc
tggaacccggaacgacctgacgtgagatattcgaccgatttgcgcgggcacacttccggc
attgaacagatagcattcaaccccgtgaaggaatctgagctcgccagctgctcaaaggat
ggaactgtccgcttttgggatgtgcgcgcaaagaactgcgtcggccgtgtcgatgttgga
ggggaggccttttccctcgcatggtcccccgatggaagcgtactgctggctgggagaatg
gatgacacattagttcctatatctgtcgaaccagtagccatgtctaccaatcctgcaccc
aatgcgccgaaagcgccatcaacctacaaagcattgtctcaccataaacaacccatccgt
acgaatgggattgcattttcacactctttcgatccaaaccttttcctcaccacaggggat
ggaactgtcaaaatagaatcgtacccatctttcgacacactacatacgctcaatgcccat
acagccgcttgtctttgtgtctcgctcgctccaactgcgaggtatctagccattggcgga
ggagattcactcatttctctctgggatacaacgaattgggtatgccagcgcactgtttcg
agtagtggtggtggagccgttcgcggtattagctggagttgggacggacggtttatagtg
ggcgcctgtgacgaaacagactgcggaggcacaggtctggaaatattccatgctgagact
ggagatagtgtatacactataccgacgggcaatcccaacgttggggtccctgccgtagcc
tggcacccatcccgttattgtcttgcatattctctctatgcagaaggtattgggagtggc
aataacggcctacgcatcgtaggtgccggtgccggtgacttttga

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