Trichophyton verrucosum: TRV_02753 Help Entry TRV_02753         CDS       T01615                                  Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism tve  Trichophyton verrucosum Pathway tve03020   RNA polymerase tve03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:tve00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     TRV_02753   09124 Replication and repair    03420 Nucleotide excision repair     TRV_02753  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tve03021]     TRV_02753    03400 DNA repair and recombination proteins [BR:tve03400]     TRV_02753 Enzymes [BR:tve01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      TRV_02753 Transcription machinery [BR:tve03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      TRV_02753 DNA repair and recombination proteins [BR:tve03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       TRV_02753 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R Motif Other DBs NCBI-GeneID:  9583130 NCBI-ProteinID:  XP_003023110 UniProt:  D4D6M6 LinkDB All DBs AA seq 1744 aa AA seqDB search MSSVRFPYSKAQLRTIKEIQFGLLSPEEIKRMSVCHVEYPETMDDQRQRPREKGLNDPRL GTIDRNWRCATCEEGINDCPGHFGHIELSTPVFHIGFLTKIKKLLETVCHNCGKIKANAS DQKYLDALRFRDPKKRFDAIWRLSKDILICEADPPEEDDPFAKESSKPVQGHGGCGNVQP QVRKEGITLMGTWKPSKMRDMMDDNEIQQPEKKQITPQMALTIFRNISEEDVRLMGLSND YARPEWMIITVLPVPPPPVRPSVLVGGSGTGQRGEDDLTYKLAEIIRANQNVTRCEQEGS PEHVVREFESLLQYHVATYMDNDIAGIPQAMQKSNRPVKAIRGRLKGKEGRLRQNLMGKR VDFSARTVITGDPNLSLDEVGVPISIAQTLTYPEVVTPYNIHRLGQLVDNGPDVHPGARY VIRSSGERIDLRHHKGGGGRNFLQWGWKVERHLMDGDFILFNRQPSLHKESMMSHRVRVM PYSTFRLNLSVTTPYNADFDGDEMNLHVPQSEEARAELNQLCLVPLNIVSPQRNGPLMGI VQDTLCGIYKICRRDVFLTKEQVMNVLLWVPDWDGVLPQPAILKPRPRWSGKQMISMVLP SGLNLLRIDKDKSPISEKFSPLADGGVLVHGGELMYGMFSKKTVGASGGGVVHTIFNEYG PDAAMSFFNGAQAVVNYWLLHNGFSIGIGDTIPDLETIQKIENAVRVRKEEVDSITASAT ENTLEALPGMNVRETFESKVSRALNNARDEAGTATEKSLKDSNNAVQMARSGSKGSTINI SQMTAVVGQQSVEGKRIPFGFKYRTLPHFTKDDYSPESRGFVENSYLRGLTPTEFFFHAM AGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDIVQFLYGEDGLDGQCI ENQRVDVIKCSDEQFRNRFRVDLMDPERLLSPDILEQATEIAGDIEVQKHLDEEWEQLLK DRAFLRTVVKEDDEMMQLPINIQRILESAKTTFRIRDGTISDLHPAEVVPQVRQLLDRLL VVRGDDALSREAQESATLLFKAQLRSRLAFRRLVVEYSLNKLAFQHVLGAIESRFGKAAA NPGEMVGVLAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEILNVATNIKTPSMTV YQAPECRMNKESAKQLRSIVEHTSLRSVTESTEIYYDPNIQSTVIENDIDMVESYFIIPE DVADDSSRQSKWLLRIILSRPKLLDKGLTVQDVATKIKEAYPQDIAVIFSDNNADEQVVR IRQIQDPKQDEDDDDTEYDVTLKKLESHLLDTLTLRGVPGIDRAFINEKSRTRVLEDGSL HQSASDPECKEWVLETSGSALADVLAIPGIDASRTYSNQFVEILEVFGIEATRTALLREL TQVLAFDGSYVNHRHLALLVDVMTSRGFLMAVTRHGINRADTGALMRCSFEETVEILLDA AAFAELDDCRGVSENLILGQMAPAGTGEFDVYLDQSMLMGVVSNNAGLGAMGEEPKGMLS DGAATQYDSGSPMQENMYISSPDPDSQFSPVRQAGSENAVGFADYQPPSYGGFSPHEPRS PGGGYSPSSPFNTSPTSPAYSPSSGYSPTSPGMSITSPRFISSPAFSPASPSFAPTSPAY SPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPVFSPTSPSYSPTSPAL GGTGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFSGSPTSPGGPTSPGYSPTSPT FNPT NT seq 5235 nt NT seq  +upstreamnt  +downstreamnt atgtcttccgtcagatttccatattcgaaagcgcagttgcgcacgattaaagagatccag tttggtctcctctcacctgaagagataaagcggatgagcgtgtgccatgtcgagtatcct gagactatggacgaccaacgacaacggccacgcgaaaagggacttaacgatcctcgtcta ggcaccatcgatcgcaactggcgatgtgctacatgcgaagaaggcattaatgactgcccg gggcacttcggccacatcgaactatctacgccggtgttccatattggttttttgactaaa attaagaagctgttggaaactgtctgccacaattgtggaaagataaaagccaatgcgtct gatcagaaatatctggacgcccttcgttttcgcgatccgaagaaacgtttcgatgctatt tggcgattgtcgaaggatatccttatttgtgaagctgacccaccggaagaggatgaccct tttgccaaagagagctcaaaacctgtccagggccatggtggttgcggcaacgttcaaccc caggttcgaaaagaaggaatcacgctaatgggtacatggaaaccaagcaagatgcgcgac atgatggatgataacgaaattcagcaacctgagaagaagcagatcactcctcaaatggcc cttacaatctttaggaacatctcggaggaagacgttcgtcttatgggattgagtaatgat tacgcccgacccgagtggatgatcattaccgtattgcctgttccacccccgcccgttcga cctagtgttttggtagggggcagtggtaccggccagcgtggagaggatgatttaacatac aagcttgctgaaattatccgcgccaatcaaaacgttaccaggtgtgagcaggaaggctct ccagaacatgtggttcgcgaattcgagtctctgctgcaataccatgtcgcaacttacatg gataacgatatagctggcattccccaagcaatgcagaaatccaaccgccccgttaaggcc atccgtggaagactaaagggaaaagaaggtcgtctccgacagaacctgatgggaaaacgt gtggacttctcagctcgtactgtcattactggcgacccgaatctctcacttgatgaagta ggagttcctattagcattgcgcagacgttgacataccctgaggtggtcacaccttacaac atccatcgactaggtcaacttgtcgataatggtccagatgttcatccaggtgcacgctat gtcattcgtagctctggtgaacgtattgatcttcggcatcataagggtggtggtggccga aacttcctgcaatggggatggaaggttgagcgtcacctcatggatggcgatttcatcctt ttcaaccgtcagccatcccttcacaaggagtctatgatgagccatcgtgttcgtgttatg ccatattccactttccgactgaatttgtctgtcacgaccccgtacaacgccgatttcgat ggagatgaaatgaacttacacgtccctcaaagtgaagaggctcgagctgaacttaatcaa ttatgcttggttcctttgaatatcgtatccccgcagagaaacggtccacttatgggtatt gtgcaagacactctttgtggaatttataagatctgccgacgagacgtattcttaacgaag gagcaagttatgaatgttcttttatgggttccggactgggatggtgttcttcctcaacct gcaattcttaagccccgcccaagatggagtggaaaacagatgattagtatggttcttccg tctggcttaaacttgcttcgaatcgacaaggacaagtctcccatttcagaaaagttctcc cccctggcggatggaggtgtcttggtccatggtggtgaactgatgtatggaatgttttct aagaagactgttggtgcttcgggcggtggagttgttcatactatcttcaacgaatacgga cccgatgctgctatgagctttttcaatggagcccaggcggttgtgaactactggctcctt cacaatggtttcagtattggcattggtgatacaattcctgatctggaaactattcaaaag atcgaaaatgcagtacgtgtcagaaaggaagaagtcgactccattactgccagtgctacg gaaaacactctggaggctcttcccggtatgaacgttcgagaaaccttcgagagcaaggta tcccgtgctctgaataacgctcgtgatgaagctggtactgcgacagaaaagagcttgaag gactcgaacaacgcagttcaaatggctcgatctggttctaaaggttccaccatcaacatt tctcagatgacggcggtagtcggtcaacagtcagttgaaggaaaacgtattcctttcgga tttaaatatcggacattgccacatttcacaaaagatgactattctccagaatcccgtgga ttcgtcgagaattcgtatctccggggactgacacctacagaattcttcttccacgctatg gctggtcgcgaaggtttgattgacactgctgtcaaaactgcggagactggttatatccag cgaaagcttgtcaaggcactggaagaagtcatggttaaatacgatggaactgttcgcaac tccttgggagatatcgtccaatttctttatggtgaagatggtcttgacggccagtgcatt gaaaatcagcgtgttgatgttattaaatgctcggatgaacagtttagaaaccggttccgt gttgacctcatggatccagagcgcttgctttcgcctgacatcctggagcaggcgacagag attgcaggtgatattgaggtacaaaagcaccttgatgaagaatgggaacaactgttgaag gaccgcgcctttttgcgaactgttgtcaaggaagatgacgagatgatgcaattaccgatc aacatccagcgaattttggagtcggccaaaactacttttagaattcgtgatggcacaatt agtgaccttcacccggcagaagttgttccgcaagtcaggcagctgttggatcgtttgctt gtagtccgtggagatgatgctctctcccgtgaagctcaggaaagcgcaactcttttgttc aaggcacagctccgttcacgccttgcgttcagacgcttggttgtggaatactcactgaac aagcttgctttccagcatgttctcggtgccattgagagtcgatttggaaaagctgcggca aatcccggtgagatggttggtgtgttggctgcccagtcaattggagagccagctacccag atgactctcaacactttccattttgctggtgtgtcctcaaagaacgttacgctaggcgtg cctcgtcttaaggaaattctaaacgtcgcaacaaacatcaagacgccatctatgactgtt tatcaagcaccagagtgtcggatgaacaaagaatctgctaagcaattgcgaagcattgtt gagcatactagtctacgatcggtaacagagtcaactgagatatactacgatcccaatatc cagtcaaccgttatcgaaaacgatatcgatatggtggaatcatacttcatcattccggag gatgttgcggacgactcatcacggcaatcaaagtggttgctccgtattattctaagtcga ccaaaacttctagacaagggtcttactgtccaagatgttgcaacaaagattaaggaagca tacccccaggatatagctgttatcttcagtgacaacaacgccgacgaacaagttgtccgt attcgtcaaattcaagatccaaagcaagacgaagatgatgatgacacggaatatgatgtt accctcaagaagttggaaagccacttgctggacactctgaccctacgtggtgttcccggt attgaccgtgcgttcattaacgaaaaatcccgaactagagttctcgaggatggctcgctc catcaaagtgcaagcgaccctgaatgtaaggaatgggtactcgaaactagtggttccgcc cttgcagatgtgttggcaatccctggcattgatgctagccgcacatattctaaccaattc gtcgagattcttgaagtgtttggtatcgaagctactcgaacagcccttctcagagagttg acacaggtgcttgcctttgatggttcttacgtcaaccatcgacacttggcacttctcgta gatgtcatgacttcacgaggcttccttatggctgtaacccgacatggtatcaatcgtgca gatactggtgccttgatgaggtgctccttcgaagagactgtcgaaatacttcttgatgct gctgcttttgctgagttggacgactgccgaggcgtgtctgagaacctgatccttggtcaa atggcacccgcaggaacgggagaatttgatgtctatcttgatcagtcaatgcttatgggc gtcgtttccaacaatgcaggcttaggagcgatgggcgaggaacctaaggggatgctttct gacggtgccgctacccagtacgacagcggttcaccaatgcaagagaacatgtatatcagc tcccctgatcctgattcccagttttcacctgtcagacaagccgggtcagagaatgctgtt gggttcgctgattaccagccaccaagttatggtggattcagccctcatgaaccgaggagt cctggaggaggctactctcccagcagtccgttcaataccagtccaacttctccagcatat tctccctcgtcaggttactctcccacttctccgggcatgagcattacaagtccgcggttc atttcatctccggccttctctccagccagcccgtcatttgctccaacctctccagcttat tcaccgacttctcctggctatggacaagcccagtcacctacctcgccttcctactcgccc acttcaccaggtttctctcctacatcacccagctacagccccacgtcacccagcttcagc ccggcctcgcctgtttttagccctacatcgcctagttacagcccaaccagcccagcgttg ggaggtactggcaggcatctttcaccaacctctcctacctccccgaagtataccccaact tcgcccggatggtctcccaccagtccagaggcatattctccaacctctccaaacttctct ggctcgccgacttctccaggtgggccgacgtctccaggctatagcccgacatctcctact tttaacccaacgtaa

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