Trichophyton verrucosum: TRV_02956
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Entry
TRV_02956 CDS
T01615
Name
(RefSeq) DNA polymerase POL4, putative
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
tve
Trichophyton verrucosum
Pathway
tve03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
TRV_02956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tve03400
]
TRV_02956
Enzymes [BR:
tve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TRV_02956
DNA repair and recombination proteins [BR:
tve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
TRV_02956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
9576946
NCBI-ProteinID:
XP_003022908
UniProt:
D4D776
LinkDB
All DBs
AA seq
652 aa
AA seq
DB search
MDKETFCGELYASNKEDQDDDCVLSTLRNSRRREVNNNSTEDPNAISEKALPREASERET
VGVPGLDHSIKPNKKPKLAKDGRREKTKESFNTVNDHPSVLGGLENCHGNVIIEENANQL
ADFIPNDDISQARRIRISRVLKFGATRAAKFDASVTHIVAERRLNYEDVVEYLQVSSVPA
NIILVNENYPSECIMNRRILDASSPRFQIKRKLLSEPHGISSGERRHDCIPANSSRGTDS
KKVGDRSTEEAVPILPGHLPDFPAKDTADQDVDQLTYSKPLDSSDEEDDEIVPGGFQSGL
TTDCPSWQKSFTCMNKMDGKDRADNPNARTIEVLQQMLNYYERTADQWRCLAYRRAIAAL
RRERNKVVSKSQALKIKGIGERLAAKIEEIVWTNRLRRLEQANMEPSDALLSQFLNIYGV
GYQQASKWVAQGYKSLDDLKNRANLTTNQKIGIERYDDFQKRIPREEVEAHGAIVREAVV
AMDSSYTVITGGSYRRGAADSGDIDLIITKEGVSLQEIHDQIMTVVVPQLFERGFLKTGL
AVSSRADGSKWHGASALPGNPVWRRIDLLFVPGDELGAALIYFTGNDIFNRSLRLLASKK
GMCLNQRGLFSDIMRGPGRVKLNAGHLLESRDEKRIFELLAVPWRPPEHRVC
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggaaactttctgtggagagctttacgcttcaaataaggaggatcaggatgat
gattgtgttctatctacgttacgaaacagccgccgaagagaagttaacaacaacagtact
gaggacccgaatgcgatctcagagaaagcattaccacgggaagcctctgaaagagagaca
gtgggcgtaccaggccttgatcattcaataaagcctaataagaagccgaagttggctaag
gatggcaggcgagagaagaccaaggaatcctttaatactgtgaacgatcatccctcagtt
ctcggcggccttgaaaattgccacggaaatgtaataatagaagagaacgctaaccagctc
gcagattttatacctaatgatgacatatcacaggctagacgaattcgcatttcaagggtc
cttaaatttggagcaacccgcgcggcaaagttcgatgcctccgtcacacatatagttgct
gaaaggcggcttaattacgaggacgtggttgagtatcttcaagtgtcctctgtcccagcc
aatattatcctggtaaatgagaactatccatcagaatgtatcatgaaccggagaatattg
gatgcttctagccctcgcttccaaattaaacggaagttgctgtctgaaccacatggaata
tctagcggcgaacgacgacatgattgcattcctgcaaattccagtcgaggtaccgactcc
aaaaaggttggcgacaggtccactgaagaagcggttccaatacttccagggcatcttccc
gattttccggccaaagatacggctgaccaggatgttgatcaactaacatatagtaagcct
ctggattcctctgatgaggaagatgatgaaattgtcccaggaggatttcaatctggtctc
acaacagactgtccttcatggcagaaatcattcacctgcatgaataaaatggatggcaaa
gaccgtgcagacaatcccaacgctcgcacaatcgaagtcttgcagcaaatgcttaactac
tatgaacgaactgccgaccaatggcggtgtcttgcatatcggcgtgcaatcgctgctcta
cgcagggaacgtaataaagtagtgtcaaaaagccaggccttgaagataaaaggaataggt
gaacgcctggcggccaaaattgaggaaattgtatggactaatcggctccggcgactagag
caagcgaacatggaaccaagtgatgccctgctctcccaatttcttaacatatacggtgtt
ggataccaacaagcttccaaatgggttgcacaggggtataaatccttggacgatttgaag
aaccgagctaatctaactactaaccaaaagattgggattgaacggtatgatgattttcag
aaacggatacctcgagaagaagtcgaggcacatggcgctattgtgcgggaggctgttgta
gccatggatagttcctataccgtcattactggtggctcctacagacgcggagctgctgat
agcggagacatcgatctcattataaccaaggaaggagtcagtctgcaggagatacatgac
cagatcatgaccgttgtcgttccccagctatttgaacgcggattcctaaagacgggactt
gccgtgtcctcacgagcagatgggtcaaaatggcatggtgcttcggcacttcctgggaac
cctgtatggcgccgtatagacctgctatttgtgcccggtgacgaactcggcgctgcactg
atttacttcacgggcaatgatatattcaaccggagcctacggttgctggcaagcaagaag
ggtatgtgtttaaaccagagaggtctcttctcagatattatgcggggtccgggccgggtg
aagttgaatgccggccatctcctggaaagccgggacgagaagcgaatcttcgagctcctt
gcagtgccctggaggccaccagagcatcgagtttgctga
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