Trichophyton verrucosum: TRV_03185
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Entry
TRV_03185 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
tve
Trichophyton verrucosum
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tve03036
]
TRV_03185
Chromosome and associated proteins [BR:
tve03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
TRV_03185
microRNA pathway
RISC loading complex
TRV_03185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
DSRM_2
Ribonucleas_3_3
Dicer_dimer
ResIII
DEAD
dsrm
Motif
Other DBs
NCBI-GeneID:
9581323
NCBI-ProteinID:
XP_003022664
UniProt:
D4D7V1
LinkDB
All DBs
AA seq
1510 aa
AA seq
DB search
MEDNSDIDKATTNVPQTLKEENTNVPAADSTPETRSGTPTESETEDEKPNPANPSEKRRA
LNCKFKDLLSRRAEVITEDDVKAVIKATDDTQLSMTNIIAKQDYTSIIHDPREYQLELFE
KAKEKNIIAVLETGSGKTLIAVLLLKHVIEQELTDRSLGLPPRISFFLNNIPQKIDKFCG
AMQTDLWNKETWEGHFKRNMVIVCTAEVLHQCLLHSFIQIDQINLLIFDEAHHAKKEHPY
ARIIKDFYLKEPERKPKIFGMTASPVDAKVEVVGAAKTLEAMLDSQITTASNPALLRQSV
TRPTEEIWEYDRLELPFETPLYSKLRQKFGDIKVLEKIFKFSRETSSSLGSWCSDWIWSY
CLSEETLPKLEARSNRPLMKSIPDQSSCDTEAERIREAGAIIKEHEFGDPVANPELLSRK
VLLLRDQLLRRFKENPDTRCIVFTAQRHTARILRDLFKKIGSQYIRPNLLVGVRSGGDKI
GLDISFREQFLNVIAFRKVNESNEYLIPGLGTDFNLRFDLYSTLIQYIQSRGRARHMEST
VCITYLEVSLVQTNIFTQFAHMVERNNLMHETAVEEEVLTRFCKSLPEDRLLKGTGDIDM
MIEKDRQQKSYTIKSTGAKLTYPSSLAVLAHYASTLQYEKELSTQVSYIIHPKDGAFICE
TILPEKSPIRGCMGKSASRKLLAKQSAAFETCLLLRKNRLLDEYFISTYHKRLPVMRNAR
LAITSKKSNKYSMISKPAAWELSRGESPTVLYATVLSLSDCEKLQKSYHPIVLLTRVPMP
DFPAFPLYLEHNKKCSSCSIRVEEGLKVIPPELELLTKFTFRVFEDVFHKIYEENSSLVS
YLIAPAKLDGVTDIKKSNPVELIDWQMLQYIQENEELLWSPDMPNEFLENRFLVDKWDGR
YRYFSIKVDPTRRPQDPVPENVARRRYMDNIMNYCLSLFKNSRARFMKRCNWDQPVLRSE
LIQLRRNFLDIDENQKSPPVDYYVCAEALKISAISVPLATQIFVFPAMIWRMESYLIALE
ACEKLQLKIPPELALEALTKDSENTEEHGMEQIRFQSGMGKNYERLEFLGDCFLKMATSI
SLFAMNPDNDEYDYHVKRMLLICNQNLFNNAIILEIFKFIRSRSFSRRAWYPEGLTLLKG
KDKKEGPNGPEHALADKTIADVCEALIGASLLAGGPDHKFDMATKAVTVFVNSDDHRVEK
WADYSRLYSLPNYQTASASASEIDVANQIQSKLGYCFKYPKLLRSAFMHPSYPSQWANVP
CYQRLEFLGDSLLDMVCVNHLFERYPDKDPQWLTEHKMAMVSNKFLGSLAVSLNLHVHLI
HISNTLQGQITSYTEELQAMKIKMEGNLEAWTYTNEPPKCLPDIVEAYLGAIFVDSNFNF
DVVDDFFRKFIQHYFEDMSVYDTFANKHPITFLHTRLAVDFGCTFYALKADEIPCVDGTT
VRALAAVCVHDDIVAEGVASSPRHAKLKASQNALQILEEMSAADFRAKYKCDCRERQEEH
EEEEPETAEE
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggaggataactctgatatcgacaaggctactacaaatgtgcctcagacattgaaagag
gagaacaccaatgtcccggctgctgattcaacccccgagactcgatcagggactcctact
gagtctgagacagaagatgaaaaaccaaacccggccaacccaagcgagaaacggcgagca
ctcaactgtaaattcaaggatttgctgtcacggcgggctgaagtcatcacagaggatgat
gtcaaggccgttatcaaggcaactgatgatactcagctatcaatgacaaatataattgcc
aaacaggactatacctcgattatccatgaccctcgtgaatatcagcttgagctttttgag
aaagcaaaggagaagaatatcattgctgtactcgagactggctctggaaaaacacttatt
gctgtccttcttctcaagcatgtcattgaacaggaattgacagaccgtagccttggactg
ccgcctcgtatctcattcttcctgaacaatatacctcagaagatagacaaattttgtggt
gcaatgcagacagatctctggaacaaggaaacctgggaaggccacttcaagagaaatatg
gttattgtctgtactgcagaagtgcttcatcaatgtctgcttcattcctttattcagatc
gaccaaatcaacctgttgatctttgatgaggctcaccatgctaaaaaggagcatccatat
gcaagaatcatcaaggacttttatctaaaagagcctgagaggaagccaaaaatatttggc
atgactgcatcaccagtggatgctaaggttgaggttgtaggggcagcaaaaactcttgaa
gccatgctcgacagccagataaccacggcatcaaatcctgctcttctacggcagagcgtg
actcggccaacagaagagatttgggaatatgataggcttgaattgccttttgagacacca
ctttatagcaagcttcgacagaagtttggtgatatcaaggtcctggaaaagatatttaaa
ttctcacgtgagacatcctcaagtctaggaagctggtgctctgactggatatggagctac
tgtttgagtgaggaaaccctgcctaagctagaagctaggtcaaaccggcccttgatgaaa
agtatacccgaccagtcctcttgtgatacggaagctgaaaggatcagggaggcgggagcc
atcatcaaggagcatgagtttggtgacccggttgctaacccggagcttctcagccgtaag
gtgctactgctgagagaccagctcctacggcggttcaaagaaaatccagatactcgatgc
atcgtctttactgcacaacgccatacagcaagaattcttagagatcttttcaagaaaatc
ggatctcaatatattcggccaaacctactggttggtgttcggtctggtggtgataaaatt
ggactagacatctctttcagagaacagttcctgaatgtgatagctttcaggaaggtgaat
gaatccaacgagtatttaataccgggccttggaactgacttcaatctcagattcgatctt
tactctacactcattcaatatatccagagcagaggcagagctcgacatatggagtccacg
gtatgcattacgtacctggaagtttctctagtccaaactaacatctttactcagtttgca
cacatggtggaacgcaataacctaatgcatgagactgcggtcgaggaagaagttctcact
cgcttctgcaaatcccttccagaagacagattattaaaggggactggtgacattgatatg
atgatagaaaaagacaggcagcaaaaatcttacactatcaaaagcacgggtgcaaagctc
acctacccttcttcattagctgttcttgcacactacgcaagcactttgcaatatgaaaaa
gaactgtcaactcaggtcagttatatcatccatccgaaagatggtgctttcatctgtgag
accatactccctgagaaatcaccaatacgaggatgcatgggaaagtcggcctcgcggaag
ctccttgcaaagcaatccgcagcctttgagacgtgcctgctgctgcgcaagaacaggtta
ctcgatgaatatttcatttcgacctaccacaaacgactcccggtaatgagaaatgctcga
ctcgccatcacatcgaagaaaagcaacaaatatagcatgatatccaaacctgcagcgtgg
gaactctctaggggagagtcaccaacggttctatatgccactgttctctcactctcggac
tgcgagaagctgcaaaagtcttaccacccaattgtgttgttgacaagagttccaatgcct
gacttccccgctttccccttatacctggaacacaataagaaatgcagtagctgcagcata
agagttgaggaaggactcaaagtcataccacctgaattggagcttttgaccaaattcacc
ttcagggtcttcgaggatgtctttcacaaaatttatgaagaaaattcatcgctggtgtct
tacttgattgcacccgcaaaacttgacggtgttacagatatcaaaaagtcaaacccagtc
gaactgatcgattggcagatgctacaatatattcaagaaaatgaggaacttctctggtcg
cctgatatgcctaacgaattcctcgagaacaggttccttgtagacaagtgggatgggaga
tatcgttatttttcaatcaaagttgatccaactcggcggcctcaggacccagttccagag
aacgtggcccgacgccgatacatggacaacattatgaactattgtctcagcttgttcaaa
aactcgcgagctagattcatgaaaaggtgcaactgggaccagccagtattacgctcggaa
ctcatacagcttcgccgaaacttcctggatatagatgagaaccagaaaagtcctcctgtg
gactactatgtctgcgcggaggcattaaaaatttctgcaatctctgttcccttggccaca
cagatattcgttttcccagcaatgatctggagaatggaatcttatctcattgctttggag
gcctgtgaaaagcttcagctgaagattcctccagaactagcgcttgaggcattaactaaa
gactcggagaacacagaggagcacggcatggaacaaattcgattccaaagcggaatgggc
aagaattatgaacgacttgagttccttggtgactgcttcttgaagatggcaacatccata
tctctctttgccatgaatccagataatgatgaatacgactaccatgtcaaacgtatgcta
ctcatctgcaaccagaatttgttcaacaatgcaataattctggagattttcaagttcatc
cgcagcagatcattctcaagacgagcatggtatcctgagggtttaacactgcttaaaggc
aaagataagaaagaaggtccaaacggtcctgagcatgcacttgctgacaaaactattgct
gatgtatgcgaggctctaattggagcatctctactggctggaggtcctgatcacaaattt
gacatggctacaaaggcagtcacagtttttgtcaatagtgatgaccatcgcgtggaaaaa
tgggcagactactcaagactgtactctttgccaaactaccaaacagcatcagccagtgca
tctgagattgacgtcgccaaccaaatccagtcaaaactcggctattgtttcaagtaccct
aagctccttcggtcggctttcatgcacccatcgtatccatctcagtgggcaaatgtccct
tgttaccaacgtctggaattccttggtgattctttacttgatatggtttgcgtcaatcat
ctttttgaaagataccccgacaaagacccccaatggctcacggagcacaaaatggcaatg
gtatccaacaagttccttggttcgcttgcagtcagcctcaacctccatgtccatcttatc
catatcagcaacactctccaaggccaaataactagctacactgaagaactgcaggctatg
aaaatcaaaatggaaggaaaccttgaggcctggacgtacacaaacgaaccaccaaagtgt
ttaccggacattgttgaagcatacctcggagctatattcgtggactcgaatttcaatttt
gacgttgtggatgatttcttccgaaagttcatccagcactatttcgaggacatgagtgtg
tacgatacgttcgctaacaagcaccctatcaccttccttcacactcgactcgccgtagat
ttcggctgcacgttctacgccttgaaagcagatgaaataccatgtgtagacggcaccacg
gtgcgtgccctcgcggctgtttgcgtccacgacgacatcgtggccgaaggggtcgcctca
tctcctcgccatgccaagttgaaggcgagccagaatgcccttcagatcctggaggagatg
agtgcggcggacttccgagcaaagtacaagtgcgactgccgcgagagacaggaggagcac
gaggaagaggagccagagacagcggaagagtga
DBGET
integrated database retrieval system
