Trichophyton verrucosum: TRV_03404
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Entry
TRV_03404 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
tve
Trichophyton verrucosum
Pathway
tve03013
Nucleocytoplasmic transport
tve03015
mRNA surveillance pathway
tve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRV_03404
09122 Translation
03013 Nucleocytoplasmic transport
TRV_03404
03015 mRNA surveillance pathway
TRV_03404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tve03019
]
TRV_03404
03041 Spliceosome [BR:
tve03041
]
TRV_03404
Messenger RNA biogenesis [BR:
tve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
TRV_03404
TREX complex
TRV_03404
Spliceosome [BR:
tve03041
]
Complex C
Other components
EJC/TREX
TRV_03404
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
TRV_03404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FoP_duplication
RRM_1
Motif
Other DBs
NCBI-GeneID:
9581001
NCBI-ProteinID:
XP_003022454
UniProt:
D4D8G8
LinkDB
All DBs
AA seq
171 aa
AA seq
DB search
MLTYNQNGTSRGIASIIFSRPETAIKAAKELNGLLIDKRPIKIEVVVDASRAPPVPTPKP
LTERVAQPKSQPKPASAAKAGRKRDARGRTQRGRNAGRPKSKTLEELDAEMVNYFAEAPA
STNAPAPAANGAAPQPAGNGEDLGMVDEISVSRWFIPVLFKYYPNANVVFQ
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgctgacctacaatcagaacggcaccagccgtggtatcgcttctatcatattcagccgc
cctgaaactgctatcaaagctgctaaggagctgaatggactcctgatcgacaaacgcccc
attaaaattgaggttgttgttgatgcatcccgtgcgcctccggttcctacacccaagcca
ttgaccgagcgtgttgctcaaccaaagtctcagcccaagcccgcttctgctgcgaaagct
ggacgaaagagagatgcccgcggtcgaacccaacggggccgcaacgccggtcgcccaaag
tccaagacccttgaagagcttgatgctgaaatggtaaactacttcgccgaagctcctgcc
agtactaacgctcccgctcctgcagccaatggtgctgctccacagcccgctggtaacggc
gaagacctcggaatggttgatgagatctccgtaagtagatggtttattccagtgctcttt
aagtactatcccaatgctaacgttgtgttccagtaa
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