KEGG   Trichophyton verrucosum: TRV_03404
Entry
TRV_03404         CDS       T01615                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
tve  Trichophyton verrucosum
Pathway
tve03013  Nucleocytoplasmic transport
tve03015  mRNA surveillance pathway
tve03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TRV_03404
  09122 Translation
   03013 Nucleocytoplasmic transport
    TRV_03404
   03015 mRNA surveillance pathway
    TRV_03404
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tve03019]
    TRV_03404
   03041 Spliceosome [BR:tve03041]
    TRV_03404
Messenger RNA biogenesis [BR:tve03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     TRV_03404
    TREX complex
     TRV_03404
Spliceosome [BR:tve03041]
 Complex C
  Other components
   EJC/TREX
    TRV_03404
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    TRV_03404
SSDB
Motif
Pfam: FoP_duplication RRM_1
Other DBs
NCBI-GeneID: 9581001
NCBI-ProteinID: XP_003022454
UniProt: D4D8G8
LinkDB
AA seq 171 aa
MLTYNQNGTSRGIASIIFSRPETAIKAAKELNGLLIDKRPIKIEVVVDASRAPPVPTPKP
LTERVAQPKSQPKPASAAKAGRKRDARGRTQRGRNAGRPKSKTLEELDAEMVNYFAEAPA
STNAPAPAANGAAPQPAGNGEDLGMVDEISVSRWFIPVLFKYYPNANVVFQ
NT seq 516 nt   +upstreamnt  +downstreamnt
atgctgacctacaatcagaacggcaccagccgtggtatcgcttctatcatattcagccgc
cctgaaactgctatcaaagctgctaaggagctgaatggactcctgatcgacaaacgcccc
attaaaattgaggttgttgttgatgcatcccgtgcgcctccggttcctacacccaagcca
ttgaccgagcgtgttgctcaaccaaagtctcagcccaagcccgcttctgctgcgaaagct
ggacgaaagagagatgcccgcggtcgaacccaacggggccgcaacgccggtcgcccaaag
tccaagacccttgaagagcttgatgctgaaatggtaaactacttcgccgaagctcctgcc
agtactaacgctcccgctcctgcagccaatggtgctgctccacagcccgctggtaacggc
gaagacctcggaatggttgatgagatctccgtaagtagatggtttattccagtgctcttt
aagtactatcccaatgctaacgttgtgttccagtaa

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