Trichophyton verrucosum: TRV_03919
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Entry
TRV_03919 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
tve
Trichophyton verrucosum
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tve03021
]
TRV_03919
03036 Chromosome and associated proteins [BR:
tve03036
]
TRV_03919
Transcription machinery [BR:
tve03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
TRV_03919
Chromosome and associated proteins [BR:
tve03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
TRV_03919
SLIK complex
TRV_03919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Chromo
HTH_CHD1_Hrp3
Helicase_C
CHD1-like_C
HDA2-3
ResIII
Cdh1_DBD_1
DEAD
AAA_22
CHDCT2
Motif
Other DBs
NCBI-GeneID:
9578844
NCBI-ProteinID:
XP_003021971
UniProt:
D4D9X6
LinkDB
All DBs
AA seq
1500 aa
AA seq
DB search
MPDAPSDGEMFPSNPENMDDSDASHESMNAEEDAASANDDDDDESVNGVDAGMSSHHSSD
DESIGGSEDAAGEDVAEFTMENGVDAPPSEMFSSSPGSKRGVKRKSSVDEEEYIRNNPTL
YGLRRSGRARPTRRLDQESSASESDVAPPPKRRRPGRTSDRPSPVQMPESSSDSDSDAYE
GPRRSRQGKKQRRNNQSDLKNSYIPTHGEVRFSTRRANKVCNYNEESDDNMFEDEDEEGT
PGEWTYTVDDTTPAIDKILYHRFKEGVDLEKPDLGRRDCEYYTKWQGLAHYHATWETVDT
LANCRGIRRLDNYIRREIEQEILFMRDPDVIPEEREKWSLDRERYIEKIDHFKQVERVIG
SREVDGATEYYIKWKRLPYDGCTWEEGSLISNMAQAQIDAYLDRCSHPPISSRAESNPAT
RSKFEPIHTNPDFIQNGQLKEFQIKGVNFLAYNWVRGRNVVLADEMGLGKTVQTVAFINW
LRHVRQQQGPFIVIVPLSTMPAWSETFDYWTPDVNYIVYSGPEPARRIIKDYELLADGNL
KRPKFNVLLTTYEYVLQDASFLNQIKWQFMAIDEAHRLKNRDSQLYTKLLDFKSSCRLLI
TGTPVQNNLGELSALMDFLNPGVIEIDENMDLNSEAASAKLADLTQAIQPYMLRRTKSKV
ESELPPKSEKIIRVELSDVQLELYKNILTKNYDALNHGGKGPKPSLLNIMMELKKASNHP
FMFWGPEEQAGGSTRREDQLKALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMVRMLNIL
ANYMDARGFNYQRLDGTIAAGPRRLAIEHYNAPGSTDFTFLLSTRAGGLGINLMTADTVI
LFDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSKDTVEEEVLERARNKLLLEFITIQRG
VTDNEATSLKNKLAQAGHHVNEPTSFDDISRILKQRGQRMFEQSDNQKKLEELDIDAVLA
NAEEHKTVEEDAIEVSGGIDFINECQYVDVKFDDLSWDDIIPKEYLEKIKAEEELEAQRR
PPPKEEPTENTNSNAMISDEREERKAKRRARQQVNLDVEIMSDAEGPDPSAPLSEKEYRH
LIRAYLRYGDMKDRQEEIIKEARLVNRDLTVVKDALNEVIEKATALEQEENNRIRALERE
GKSFTKKERKAILFDHKGVKRINAETIVSRPGEMRLLREATSSLQDITSFRIPEATKGAD
YSCSWGAREDGMLCLGIARHGYGAWTQIRDDPELGLSDKFFLDEHRVDRKQERLSGKGEG
SKSPGAVHLVRRADYLISVLKAKASNGSNAAARKALENHHRNNKKVHSRNAHRTVSASPA
PSLPRKGRESEKSRRRMQNRASRDSADGSHTPLRDHRDRDRERDRERDRGKPVDSDKARR
HSKEEAHRRRSDDRTPTGGDTTLRSIFKPIREHLRRVSQVTKENIPSKSKRVAELRRLLQ
VVGDFIHGILDGQETAASLEERLWDYCAITYWPNKGTPGSALLTMYEKIAKDGGRVEASN
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atgccagatgcgcctagtgatggcgagatgttcccttcaaacccggagaatatggacgac
tccgatgcctcccatgaatctatgaatgccgaagaagacgcagcttcggcaaacgatgat
gacgacgatgaaagtgtcaacggtgttgatgccgggatgagctcacaccattcttctgat
gatgaaagcattgggggctcggaagacgcggctggtgaggacgttgctgaattcacaatg
gagaacggcgtagatgcccctccgtcggagatgttttcgtcctcaccgggctctaaaagg
ggagtaaaacgcaaatcctctgttgacgaagaggaatatatcagaaacaaccctactctc
tacggcctacgacggagtggacgcgctcgtccaactcggcggctggatcaagagtcctca
gcctccgagtccgatgttgccccaccgccaaaacgacgtcgtcccggccgtacctctgac
cgtccttccccagtccagatgcctgagtcgtcgtcagactctgatagtgacgcgtatgaa
ggtccgcgtcgcagtcgacaggggaaaaagcaacgccggaacaaccaaagtgatctgaaa
aactcctacataccaacacatggtgaagttcgcttttcaacacggcgggcaaacaaggtc
tgtaattacaacgaagagagtgacgataacatgtttgaagatgaggacgaagaaggtact
cctggggaatggacatataccgtcgatgacaccaccccggccatcgacaagatcctctat
catcgcttcaaagaaggtgtagaccttgaaaaacctgatctaggccgccgtgactgtgaa
tactacaccaagtggcagggtttagcacattaccatgcaacctgggaaacagtcgatacc
cttgctaactgccgtggcatcaggcgtctagacaactatatccggagggagattgaacag
gagattctcttcatgagagatcccgatgtgatcccggaggaacgagaaaaatggagtctt
gaccgcgaacgatacattgagaaaattgaccacttcaagcaggtcgaacgtgtaatcggt
tcccgtgaagtcgatggcgcaaccgaatactacatcaaatggaaacgtttaccttatgat
ggctgtacatgggaagaaggaagcctcataagcaacatggctcaagcccagattgatgcc
tacctcgaccgctgctcccaccctccgatctcctccagagcagagtctaatcctgcaacc
cgctccaagttcgaacctatacataccaacccagactttatacagaacggtcaactcaag
gagttccaaattaagggagtcaacttccttgcttacaactgggtccgcggccgcaacgtt
gtccttgccgacgaaatgggtctaggtaaaactgtccagacggtagcattcatcaactgg
ctacggcacgtcagacagcaacagggtccattcatcgtcatcgtcccattaagtaccatg
cccgcttggagtgagacatttgactattggacacctgacgtcaactacatcgtctacagc
ggtccggagcctgctcgaaggatcatcaaagactacgagcttttggctgatggcaatttg
aaacgtcctaaattcaatgttctcctcaccacttatgaatatgttctgcaagacgcaagc
tttttaaaccaaatcaaatggcaatttatggcaattgatgaagcgcatagattgaagaat
cgtgactcacagctatataccaaactacttgatttcaagtcgtcctgtaggctccttata
acgggaactccagttcaaaacaacctgggggaactctctgccttgatggactttctcaat
ccgggcgtcatcgaaattgacgagaatatggacctaaactcagaagctgctagtgcaaag
ctggctgacctaacccaagctattcaaccctatatgcttcgtcgaaccaagtccaaggtc
gagagtgagcttccgccaaagtctgaaaagatcattcgcgttgagttatccgatgtccaa
ctcgaactgtataaaaacattctgaccaagaactacgacgctctcaaccacggcggcaag
ggacctaaaccgtccctactcaacatcatgatggaattgaagaaagctagtaatcatcca
ttcatgttctggggccctgaagagcaagctggagggagcacacggcgggaagaccaactg
aaggccctcgttactagtagcgggaagatgatggttctcgatcagctcctgactaagtta
aagaacgatggccatcgtgtgctgattttcagtcagatggttcgaatgctgaacattttg
gctaactatatggatgctcgcggtttcaactatcaacgtctggatggtaccattgccgcc
ggccctcgtcgcctcgccatcgaacactacaatgccccgggcagcactgactttaccttt
ttactctccacccgtgctggtggtcttggtatcaacctgatgacagctgatacggttata
ttatttgattcggactggaacccacaagctgatctgcaggctatggctcgagctcaccgt
atagggcaaaccaagcctgtcagcgtataccgtctggtctccaaggataccgtggaagag
gaggttttggaaagagctagaaacaagctgttgctggagttcataactatccaaagaggt
gttactgacaatgaagccactagcctaaaaaacaagcttgctcaagctggtcatcatgtt
aatgaacctacttccttcgatgatatctcgcggattctcaaacagcgtggacaacgaatg
ttcgagcaatctgataaccagaagaaactcgaagaacttgacattgatgctgttcttgcc
aacgctgaagaacacaagactgtcgaagaagatgctattgaggttagcggaggaatcgac
tttatcaatgaatgccaatatgttgatgtcaagttcgacgatctttcatgggacgatatc
attccaaaggaatacctggagaagatcaaagctgaagaggaattagaagcccaaagaagg
ccgcccccgaaggaagagcctactgaaaacacaaattctaatgccatgatcagcgatgaa
cgcgaggagcggaaagccaagaggcgagctcgccaacaagtgaatttggatgttgaaatc
atgtccgatgccgaaggcccagatcccagtgcacctctaagtgagaaggaataccgacat
ctcatccgtgcatacctgagatacggtgatatgaaagatcgccaggaagaaatcataaaa
gaagcacgcctcgtgaaccgcgatcttaccgttgtgaaagatgcacttaatgaggtcatt
gagaaggctactgcccttgagcaggaggaaaacaacagaattcgtgcccttgaacgcgag
ggtaagagctttactaaaaaggaacgcaaggcaatcctttttgatcacaagggtgtcaaa
cgcatcaatgcagaaactatcgtcagtaggcctggggaaatgcgtcttctacgtgaggct
acctccagtttacaggacataacgagtttccgcataccagaagctaccaaaggtgctgat
tactcctgctcatggggtgctcgagaagacggaatgctgtgcctgggcattgctcgccac
ggctacggagcatggacacagatccgcgatgatcccgagctaggcctaagcgacaaattt
ttcctcgatgagcaccgtgtcgaccgcaagcaagagcgactgagcggcaagggtgaagga
tcgaaatctcccggggctgtacatctggttcgaagagcagattacctcatatcggttctt
aaggcgaaagccagcaatggttccaacgccgcggcaaggaaggctttggaaaaccaccac
cggaataataagaaagtccattctcggaatgctcatcgaaccgtttctgcctctcctgct
ccctccctcccacgaaaaggtagagaaagcgaaaagtcgaggcgccgtatgcaaaaccgt
gccagtcgggatagtgcggatgggtctcacactccattacgagatcatcgagatcgagac
cgggaaagagaccgggagagagaccgtgggaaaccagtcgattcagataaagcgcgcaga
cattccaaggaagaagcacatcgtcgtcgtagtgatgatcgtactccaacgggcggtgac
actacgcttcggagtatcttcaagcccatccgcgagcatctaagacgagtgtcacaggtc
actaaggagaatattccaagcaagtcaaagcgagttgctgaacttcgtcgattactgcaa
gtggttggagacttcattcacggtattctcgacggtcaagaaactgcagcttcacttgaa
gaaagattatgggattactgtgctattacttactggccgaacaaaggaacaccagggagc
gcacttctcactatgtacgaaaagatagcaaaggatgggggacgcgtcgaagcttcaaat
taa
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integrated database retrieval system
