KEGG   Trichophyton verrucosum: TRV_04429
Entry
TRV_04429         CDS       T01615                                 
Name
(RefSeq) DNA-directed RNA polymerase III complex subunit Rpc25
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
tve  Trichophyton verrucosum
Pathway
tve03020  RNA polymerase
tve03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TRV_04429
  09124 Replication and repair
   03420 Nucleotide excision repair
    TRV_04429
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tve03021]
    TRV_04429
   03019 Messenger RNA biogenesis [BR:tve03019]
    TRV_04429
   03400 DNA repair and recombination proteins [BR:tve03400]
    TRV_04429
Transcription machinery [BR:tve03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     TRV_04429
Messenger RNA biogenesis [BR:tve03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     TRV_04429
DNA repair and recombination proteins [BR:tve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      TRV_04429
SSDB
Motif
Pfam: SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 9578417
NCBI-ProteinID: XP_003021456
UniProt: D4DBD0
LinkDB
AA seq 104 aa
MFFIHFLEHVLTLHPSFFGSHVKEYLSQKLLDDVEGICTGDYYIVCVMDMYDISEGKIIP
GSGLAEYTIVYRAIVWKPFKGETVRDRDKKHFFIYFGGLFSASS
NT seq 315 nt   +upstreamnt  +downstreamnt
atgttcttcatacacttccttgagcatgtcctgacgctgcatccgtcgttcttcgggtcg
catgtgaaggagtaccttagccagaagctgctggacgatgtggaaggcatctgtacgggc
gactactacatcgtctgcgtgatggacatgtacgatatctctgagggcaaaatcataccc
ggcagcggtctggcagagtataccatcgtctaccgtgccattgtctggaagccgttcaag
ggagagacggtaagagatcgagacaaaaagcacttttttatatactttggaggtctcttt
tcggcatcaagctaa

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