Trichophyton verrucosum: TRV_04658
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Entry
TRV_04658 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
tve
Trichophyton verrucosum
Pathway
tve03022
Basal transcription factors
tve03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TRV_04658
09124 Replication and repair
03420 Nucleotide excision repair
TRV_04658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tve03021
]
TRV_04658
03400 DNA repair and recombination proteins [BR:
tve03400
]
TRV_04658
Transcription machinery [BR:
tve03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TRV_04658
DNA repair and recombination proteins [BR:
tve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TRV_04658
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
9578071
NCBI-ProteinID:
XP_003021226
UniProt:
D4DC06
LinkDB
All DBs
AA seq
625 aa
AA seq
DB search
MAPTSPSASASYKKKDGTLAISSDLQSITWTPKNGSDSLLSLQTASVTNLQQTPVNNPKV
MLKIFVQGPPPGQGQSQESAAPVPYVFTFTSPSNARAEADAIKEALNTIIQNTKLAQTPA
RDGTPTAPAAAKPPWYDDNRLKADMALQQSLLNFNEGLKRVFAESLRTKPASVTHGQLVS
QFWSSRIHLLRAHAIEKSQEQGAYNVLSTVKPRVEDKRRLNLSKEQIQLIFSQHPLVKKV
YDENVPKVAEEIFWSQFFQSRLFKKLRGERITDADPTDSLLDKYLKYDENTGQPANEFER
VPHLINLEGNEENVSQRQGNRPSFDMRPTPVDKVPIIRTLNSLSEKIMRNVAPADQHLTN
AENADREVYNELQLRDLREQEEQKRIMLNIRDQSRFFSEGNAGEIKKEQVVAKQDPTASL
NMLRSDFSRTYIDTPQVKLSRLVEPEDGDSSDEEQSKPKKEPVGSKASLASAKSQIFGII
GQRKAQADPESSSSTCGLSQTIFDRLALTHATTTEFLTQFWNAFLSGNPDRASEIASMVE
SLNRAMDRINEVAKAAEAERQVELDKLKKHAREVMASTGRRIRLAEVDGGEKVVKQLMGP
TINALSKATAEYQKALAQQTAEGQS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgacttctcccagcgcatctgcgtcttacaagaagaaggatggaacgctggcg
atatcgagcgatcttcagtctataacgtggactcctaaaaatgggtcagatagcttgttg
tcgttgcaaacagcgtccgtcaccaacttacagcagactcccgttaataacccgaaggtt
atgctgaaaatatttgtccaagggccaccaccaggtcaaggtcagagccaggaaagcgca
gctccggttccatacgtttttacattcacctcgccctctaatgctcgcgccgaggccgat
gcgatcaaggaagctctgaatactatcattcaaaatacaaagttagcccagacgccggca
cgagatggcacacccacagcgcctgcagctgcgaagccgccctggtacgacgataatcgc
ctcaaagccgacatggctctgcagcagtctctgttgaattttaacgagggtctaaagcgt
gtttttgcggagtctctgcgaacaaagccggcttcagttacacacgggcagcttgtatct
cagttttggtcttctcgaatacacctgctgcgggcccatgctatagaaaaatctcaggaa
caaggagcctataacgtattgtcaactgtcaagccgcgagttgaggataagcgaaggctt
aatttgagcaaggaacagatccagttgatattcagccagcacccgttagttaaaaaggtt
tacgatgagaacgttcctaaggtggcagaggagatattctggtctcaatttttccagagt
cgccttttcaagaaattgagaggcgagcggataacggacgctgacccaacggactcctta
cttgataaatacctgaagtatgatgagaatacgggacagcctgctaatgaattcgaacgg
gtgccccatcttatcaatctagaaggaaatgaagaaaatgtctctcaaagacaaggtaat
cgaccttcctttgatatgagaccaacaccggtagacaaggttcctataatcaggactttg
aactccctcagtgaaaagattatgaggaatgtggctcctgccgaccagcatctgaccaac
gctgaaaatgcggacagagaagtctataacgagttgcaattgcgagatcttcgggagcaa
gaggaacagaaacgtatcatgttgaatattcgcgatcaaagccgcttcttttctgaagga
aatgctggtgaaatcaagaaagagcaagttgtagcgaaacaagatccaacagccagcttg
aatatgttgcggtcagacttcagtcggacatacatagatacgcctcaagttaagctaagc
cgccttgtcgagcctgaggatggggatagcagtgatgaagagcaatcaaaacccaagaaa
gaaccggttggttcaaaggcaagtctagcaagtgccaaatcccagatctttggaataatc
gggcaacgaaaggctcaggcagacccggagtcctcttcgagtacttgtggcctttcacaa
acgatctttgatcgcctagctctgacgcatgccaccacaactgagtttctaactcaattt
tggaatgcgtttctgtcgggaaaccctgatcgagcttctgagattgcatcaatggtggaa
tcacttaacagagccatggatcgaataaacgaggttgcaaaggcagccgaagcagaacgg
caggtcgaacttgacaagctcaagaaacatgcgagagaggtaatggcttctacgggtagg
aggattcgtctcgccgaggttgatggcggcgaaaaggttgtcaagcagcttatgggccca
actattaatgcgttatcaaaggccacagctgagtatcaaaaagcccttgcgcagcagacg
gcagagggacagtcttga
DBGET
integrated database retrieval system
