Trichophyton verrucosum: TRV_04662 Help Entry TRV_04662         CDS       T01615                                  Name (RefSeq) hypothetical protein   KO K19525   vacuolar protein sorting-associated protein 13A/C Organism tve  Trichophyton verrucosum Brite KEGG Orthology (KO) [BR:tve00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tve04131]     TRV_04662 Membrane trafficking [BR:tve04131]  Endosome - Golgi transport   Rab GTPases and associated proteins    Rab associated proteins     TRV_04662 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  VPS13_VAB VPS13_N VPS13_M VPS13_C DUF896 Motif Other DBs NCBI-GeneID:  9578075 NCBI-ProteinID:  XP_003021230 UniProt:  D4DC10 LinkDB All DBs AA seq 3096 aa AA seqDB search MYVKNFDAGQLNVGIWSGDVKLRDLELRREALDQLHLPLNVIEGHLGELTLSIPWSNLRG KPVKVHIQDVFLLAAPKEDSTYDPEEERKREHAVKMEKLESAELIKEQNTEGMSQEEQQK NQSFTQSLITAIVNNLQVAIKNVHFRYEDAIAAPGHPFAAGVTIKELSAVSTDSNWKPTF IQSTSTSNYKLAVLNSLAVYWNTDAELFAPDHGASAESGEAGDTDAPIFSHADLLEKFRD AVATGENNQYILKPVSGKAGLELDTSQNVDHPRAKAKLIFDELGFVLDDHQYRDVLMLVD LFHYFIQHREYRSLMPACRPKEDPRAWFRFAGQAILSKIHERNRKWTWGYIKERRDNRIR YIELFKMRKREDPMSPAETEEMKALEEKLSYEDLRFWRSLARNQLRKERIECPKKVVRQQ TWSEWIWGTSPKEEDQPTSMTDEQRQELYQAIDWDEKKAIADAVDLPRDSVKFQVDSSLR AGSFTLKRDPHGKADEILKLVFENFQAKALQRPDSFLVQVDLGGLRLFDHTTDNTAFPQI VRVKDSYSMPSENVEEITEMDIPESPDVETIDLEIVKFFRPPERHMESIGALLETAGATV AEIRQQTRAGLEFALEEHKTINAQLDIQAPLIIIPESITTGDSMCLIFDAGRVSVISKLV DKETLKMVQSKQGTEIGDDDLSRLESLMYDKFLLKLDSTQVLIGKGIEATKAELDPKTES KNLHIMDRINMDFVLELCIAPKSTLTRTRISGHLPEFHASMSDTKYKNLMRLIDIAIPRF DTDESSTNSAEKVAQPETTSVESRARSQSIQFPRQKDVPVLQSENDIAGPDDKKSAESKT PKNIHRRMFEFKFTVDTLRGSLYRSDPSDERKDRLLVELVAEHFQLDYNLREYDMAADIV LKSLSIEDYIEEHSSAPEFKKIVTSRGFDANEEKDLFTLKFIRVNPSSPEFVSVYDGVEM NLDLVVSTINLIVTRKTLLTLLDFILITFTNQNPQDQVQSSHEQAASNDLKEAPKPANTG KIRISSKLERISLILNDDGIRLATLSLNTADVGIFLANETMQIKSRMGSLTLFDDINENG KSSTVRRLMSIEGDDFADFRYQTFNPKLKDYPGYDSEVALRSGSIKINFIDEPYRRVINF LVKFGKMQSIFNAARQAAANQATQIQESSSLMHFDIMVKTPILVFPRITDRDGPRDFITA HLGEIYASNEFSQADHGEAKYLVNTITAGIRHIRLTSTFYYSEDVCEELEMIEKVDMDFN IKYVQEPIDNSIPVMRVDGSMSPTNLRISQMQLKFLLELSQTIPAAFSPDQELQEGQAQQ ALPELSAGLSTAASSDKSNESKSLTDGPGKNAAEPKKSIQLELGFRVETIGLELLLVNEE APVQSLDDVSLSKFFLSNTNVKLRMLNNGSLESELLIHSFNVRDSRSKETNRFRKIMSLV NTEVQQQFMASLSMSGGTDRQLVVMVTIDSPRIIFAVDYLFSLKSFAAAAFPAEPDTDAS ESSDEESSGPAVSRDNLPSKPTTIPSSAMTAENKSSLTMSFRFNMVDSQVILVANPTIAN TEAIVLGAKQIVYSQQNASTLQITKVGMFLCRMDKFETSRLRILDDFSLELSMDTQSKSK SFSTTRIDMHVEPLILRLSPRDILLALQIMNRVSEMTSPTQPQNAASESKAIAAKPTQAD LQSPSTPVQSRLTAADRIQQSSIVKKEEMSIQMDGIRVILIGDVHILPLLDWSVQSFRVD VRDWSANMSADTTFDTFINVYNFSKSTWEPLIEPWQLGFHMSKELSPDIFSIDAYSHKNM ELTVTSATIALASKTMQFLSADEDVLSKPRGTDTPYRIRNYTGFELRVWADTGNGEEGHA CTLEDGEEYPWRFEDPTTMRENLTPEGNAGTVGIKLEGSGFDSISRIPLIREGETLYNLK PKKDKVLHKLLVEVSLGTDYVKYITFRSPLVVENKTQIPVEVGVYSPEEGHLLKIEKILP GDSRPAPVGAAYLHSLVVRPDQGFGYNWSNERLFWKDLLRRPTRTLKCQSENGQQSPPFY FQMNATFDKNDPLLSVYPYMRVRVSAPIEIQNLLPYDFKYRIYDKNLKKDWTNFLRKGGV SPVHVVELSHVLLLSIDMQDTAFRQCEFAIVNGNVQEDFRRESTLTVQDDQGQELKLGLH YFTVPDSGGAFKVSVFSPYLVLNKTGLDLNIQSKGVFHGGRSAAGRAIKTDAMNGVRSAI PYMYSYPTDDRKNRSVLRVNGSSWSKPQSFEAIGSSFEVTLPGSNGRTEYHAGVTVEEGT GKYKVTKIVTVSPRFILENRLDEELVAREPGSSNVISLKPRELVPLHFLRQAAEKQLCFC FPGVNNQWSSLFNIADLGITYVKLAKANQRQRLLKVEVLMEGATIFLRISMEAVHWPYSM KNESDAEFIFFQANPNVSEDEDDRSTTWRPIRYRLPPRSIMPYAWDYPAAKNKSLVLLCR GKERYIKLAEMGNLIPMKLPPTQDLPQKIIDIRIEAEGPTQTLVLSNFRPSRSVYRQQKP ASSQTSVSTGFEVKEINSDITFKAQLRLNGIGISLVNQNLRELVYITFREIDLKLSESKI YQTVNTTIKWIQVDNQLYGGIFPILLYPSVVPKTGREMEAHPIFTATVTRVKDDSYGVLY VKYASLLVQQMTLELDEDFIFALLDFVKVPGASWSEEREDPICEAELGIPEPKHEAQGQD VYFEVLHLHPMQLDLSFVRTERVNVEDTTESSNPLMFFVNVMTMSIGNVNDAPVRLNALL LENARVSIPMLVSNITNHYTQEFLRQVHVVIGSADFLGNPVGLFNTVSSGVADIFYEPYQ GFVMSDRPQELGLGIAKGATSFVKKSVFGITDSLTKFTGSVSKGLAAATLDKEFQDQRRM SRARNRPKHALYGVTAGGSAFATSMASGIGGLARHPLEGAEKEGFQGFVKGVGKGFLGLA TKPALGAFDLASIFDAGGLDRVRLTRFIGRTGIVKPYSQREALGQFWLKTTDDGKYFNEE YIAHLEFPGKDMLVLLTYNRIMLVRSKRLTTEWDIKLTDIQKISKERTGMTITLKGGTNG PFIPVQDESGRNWFYKQIAIGMFTYHRFSRQVEHIQ NT seq 9291 nt NT seq  +upstreamnt  +downstreamnt atgtatgtgaagaacttcgatgcaggacagcttaatgtcggtatatggtccggtgatgtc aaactacgagacctggaacttcgccgcgaggcacttgaccaactacatctaccgctgaac gtcatcgagggccatctcggcgaactcacgctctctattccatggtctaatcttcgaggg aagcccgtgaaagtgcatattcaagatgtgttcctccttgcggcgccgaaggaggattcc acttacgacccagaagaagagaggaagagagagcatgcggttaagatggagaagcttgaa agtgctgagcttatcaaggagcagaataccgagggtatgagccaggaggagcaacagaag aaccagagctttacgcagagcttgatcactgccatcgtcaacaatctccaggtggctatc aagaacgttcattttcgttatgaagatgctattgctgctcctgggcatccgttcgccgcg ggtgtcacgatcaaggaacttagtgctgtcagcacggattcaaattggaaacctaccttt atacagtcgacatctaccagcaattacaaacttgctgtcctgaactctctggcagtctac tggaacacagatgcagagctctttgcaccagaccatggagcttctgcagagtcaggagaa gctggagatactgatgccccgatattcagccatgctgatttgctagagaaattccgagat gctgttgctacgggtgagaacaatcagtatattctcaagcctgtcagcggcaaagctggt ctggaattagatacctctcagaatgtcgatcatccgcgagccaaagctaaattgatattc gatgaactcggctttgtgctcgatgaccatcaatatcgtgatgttttgatgctagtcgac ctctttcattacttcattcagcatcgagagtatcgaagcttgatgcccgcttgtcggcca aaggaagacccccgtgcctggttcaggtttgctggtcaagccattctcagtaaaatccac gaacgaaaccgcaaatggacttggggctatataaaagaacggagggataatcgtatccgg tatatcgagttgttcaagatgagaaagagagaggaccccatgtcacctgcggagacggag gagatgaaagctcttgaagagaaattgtcgtacgaagatctgcggttttggcggtccctt gctagaaaccagctgagaaaagagaggattgagtgcccaaagaaggtcgtcagacagcag acctggtccgagtggatatggggaacgagtccaaaggaggaagaccagcccacgtccatg acggacgaacaacgacaggaactgtatcaagctatagactgggatgagaagaaagctata gctgatgcggttgatctcccccgagactccgtcaagttccaggtagactcaagcctccga gctggcagcttcaccttaaagcgagatcctcatggcaaggcggatgagatattaaagctg gtctttgagaacttccaggcaaaggcactacagcggccggattcgttcttggtccaggtt gatctcggtgggttacggctgttcgatcataccacggacaacactgccttccctcagatt gtccgtgttaaagatagctattccatgccaagcgagaatgttgaagagattactgaaatg gatatacccgaatcccctgacgttgaaacgatagaccttgagatcgtcaagttcttccgc cctccggaacgacatatggaatccatcggtgctctcctagaaactgcgggagcaaccgtt gccgaaatacgtcagcagacaagggctgggctggagtttgcccttgaagagcacaagacc attaacgcccagctggacatccaggctccacttattattatacccgagagcatcactaca ggtgatagtatgtgtctcatctttgatgccggtagagttagtgtgatcagcaagctggtc gacaaggagactctgaagatggttcaaagcaagcaaggcactgaaatcggcgacgatgac ctcagccgacttgaatccttgatgtatgacaagttcttgctaaagctcgattcaacacaa gttcttattgggaaaggcattgaagcaaccaaggctgagctagatccaaaaacggaatcg aagaacctgcatatcatggaccggatcaatatggactttgtgcttgagttatgcatcgcc cccaagtcaacactcaccaggacacggatatcaggccatcttccagaatttcacgcctct atgtcggatacgaaatacaaaaatctcatgagattgattgacattgccatcccgagattc gacaccgatgagtcgtccaccaactcagcggagaaagtcgcacaaccagaaactacgtca gttgaaagcagagccaggtcgcagtcaattcaatttcctcgacaaaaagatgtacctgtt ttacagtcggaaaacgacatcgcaggccccgatgataagaaatcagcagaatcgaagact cctaaaaacatacatcgacgtatgtttgaattcaagtttaccgtggataccctgaggggc tcattgtatcgatctgaccccagcgatgaaagaaaagatagactgctggttgaactggtg gctgaacacttccaactcgactataatctaagagaatatgacatggctgctgacattgtt ctgaaatctttgagtattgaagattatattgaagagcattcgtctgcccctgaattcaag aaaatcgtcacatccaggggcttcgatgcaaatgaagagaaggacttgttcactctaaaa tttatcagagttaatcccagctctcccgaattcgtttcagtgtatgatggcgttgaaatg aacctcgacctagtagtgtcgaccattaatctgattgttacccggaagacattgcttacc ctattggatttcattttaattactttcaccaaccagaatccacaggaccaagttcaaagc tctcatgaacaagccgcctccaatgacttaaaggaagctccgaagccagctaatacaggg aaaattcgaatcagctcaaagttagagaggatttcccttatcttgaatgacgatggcatt cgtctagccaccctcagtctgaatactgcggatgttggaatattccttgccaatgaaaca atgcagatcaaatcgagaatgggcagtctgaccttattcgatgatatcaatgaaaatggc aagtcgtcaacagtccgtcggcttatgagtattgaaggggatgatttcgcggatttccgc taccaaactttcaacccgaaacttaaagactatcctggttacgattcagaggtagctttg cgatctggttcgatcaaaataaacttcatcgacgagccgtaccgaagggttattaatttc ctagttaagtttgggaagatgcaaagtatattcaatgcagcccgtcaggccgcagccaac caagctacacaaatccaagaaagctcatcactgatgcattttgatattatggtcaagaca cccatcctggtgtttccccgaataaccgaccgagacggacctcgagatttcatcaccgct catttgggagagatatatgctagcaacgagttttctcaagctgaccatggtgaagcaaaa tacctggttaacaccatcaccgctggaatccgtcatatccgcctcacttctaccttctac tactcggaagatgtctgtgaagaattggagatgattgagaaggtggatatggatttcaat atcaaatatgttcaagaacccattgacaattccatacctgttatgcgtgtcgatggctct atgtcacccaccaatcttcggatttcgcaaatgcagcttaaattcctccttgagctatcc caaaccatccctgctgcgttttcacccgaccaagaacttcaagaaggacaagcccaacag gccctacccgaactatctgcggggttaagtacagccgctagttcagacaaatccaacgag tccaagtcactcacggacggacccggtaaaaatgccgcagagcctaaaaagtcaattcaa ctcgaattaggattccgcgtggaaactattgggttagaactgctccttgtgaacgaggag gctccggttcaatctctcgatgatgttagcttgtctaagttcttcttgagcaataccaac gtgaagctccggatgttgaacaatggatccctcgagtctgaactgcttattcactccttt aatgtacgagacagcagatcaaaggagacaaaccggttccgtaagattatgtccctggtt aataccgaagttcagcagcagtttatggccagtctttctatgtccggtggtaccgatcgc caattagtggtgatggtaacaatcgatagcccgcgtattatattcgctgtcgattatctg ttctctctcaaatcatttgcagcagcggcattccctgctgagccagatacagatgcttcg gaaagctcagatgaagagtcctcgggcccggctgtgtcgcgtgacaacctgccgtccaaa ccaacgactattccttcaagcgctatgacagcagaaaacaaatcttcccttacaatgtcc ttcagattcaacatggttgattctcaagtcatcctggtcgctaacccaacgattgcgaac acagaagctatcgtcctgggggctaaacaaatcgtctattcccagcagaatgcgtcaact cttcaaatcaccaaggtcggcatgttcctttgccgtatggataaatttgagaccagcaga ctgcgtattctggatgacttttcgctagaattatccatggatactcagagtaagagcaaa agtttctctaccaccaggattgacatgcatgtggagccattgattcttcggttgtcgcca cgagatatcctccttgctctgcagataatgaacagagtatctgagatgacttcaccgaca caacctcagaatgcagcaagcgagtcgaaagccattgctgctaaacccacacaggcagac ctacagtcgccaagtacccctgttcaatctcgattgactgcagcagatagaattcaacag tcatccatagtgaagaaggaagaaatgtccattcaaatggatggtattagagttatactg attggtgatgtacacatacttcccttgcttgactggagtgtgcagtcattccgagtcgat gttagagactggtctgcgaatatgagtgctgataccactttcgacaccttcatcaacgtt tacaatttctcgaagtccacttgggagccgttgattgaaccatggcaacttggattccat atgtcgaaagaactaagccctgacatattctctattgatgcctactcccataagaacatg gagttaacagtcacatctgcaacaattgctttggcgtctaaaacaatgcaattcttgtct gcggatgaggacgttctttcaaagcccagaggtacagatactccttatcgaatccgaaac tatactggctttgaattgcgagtatgggcagacactggcaacggagaggaagggcatgcc tgtactcttgaagacggtgaagaatacccctggaggtttgaagacccaactactatgcga gagaaccttactccggagggcaacgctggtacggtaggaattaagcttgagggcagtgga ttcgatagcatcagccgcatccccctcatccgtgaaggggaaacactttataatctgaag ccaaagaaagataaagtgctacataagctattggtggaagtcagcttggggacagattat gtcaagtatatcaccttcagatccccccttgtggtggagaataagacacagatacccgtt gaggttggggtatatagccccgaagagggacatcttcttaagattgaaaaaatacttcca ggtgattcacgtccagcaccagtgggtgccgcctacctacattctctcgtcgtgcgccca gatcaaggcttcgggtacaattggtcaaacgagaggctcttctggaaagatttgctgaga cgaccgaccagaaccctcaaatgtcagagtgagaatggacagcaatctccaccattctac ttccagatgaatgccacttttgacaagaatgatcctcttctgtccgtatatccgtacatg cgggtccgtgtctctgctcccattgaaatccaaaacttacttccatatgacttcaagtac cgcatatatgacaaaaacttgaagaaagattggacgaacttccttagaaaaggaggagtg agtccggtccatgtcgtggagctttctcatgtactcctcctaagtattgacatgcaggat accgcattcaggcaatgcgagtttgcaatagtcaatgggaatgtccaagaggatttcagg agagagtctacccttactgtccaagatgatcaaggccaagaactgaaactaggccttcac tactttaccgttcccgatagtggtggtgcctttaaggtctctgtgttcagtccctatctt gttctgaacaaaaccggactcgatctcaatatacaaagcaaaggcgtcttccacggaggc aggtctgcagcgggccgggctataaaaacagacgcaatgaatggagtccgttctgcaatt ccttatatgtattcttatccaacagacgaccgtaagaaccggtccgtcttgagggtcaat ggctcttcgtggagcaagccccagagcttcgaagccataggaagcagtttcgaggttact ttaccaggttccaacggccgaaccgagtatcacgcaggcgtgacggtagaagaggggact ggtaaatacaaagtcactaaaatcgtcacagtgtcccctagattcatactcgagaacagg ttggatgaagaattggttgctcgtgagccaggttcttccaatgttatctctctaaagcct cgtgaacttgttccgctgcatttcctcaggcaggcagctgaaaaacagctttgcttctgc ttccctggtgttaataatcagtggtcctccttgttcaacattgctgacctaggaataact tatgtgaaattggcaaaggcaaaccagcgccagagattactcaaagtcgaagtgcttatg gaaggtgctacgatattcttacgcattagtatggaggcggtgcactggccgtattctatg aagaatgaatcggatgcagaattcatattcttccaagcgaatccaaacgttagcgaggat gaagatgatcgtagcactacctggcggcctatccgttaccgtcttccgccccgtagtatt atgccctacgcatgggattatcctgccgcgaaaaacaagtctcttgttctgctatgtcga ggaaaggaaaggtacatcaaactcgctgagatgggcaacttgataccaatgaagctcccg ccaacccaggatttgccccaaaagattattgatatccgcattgaagcggaaggtcctaca caaactcttgtcttatccaatttccgaccatcaagaagtgtatataggcagcaaaagcct gcctcttctcaaaccagtgtgtccactggattcgaggtcaaggaaatcaactcggacata acgttcaaagcccaacttcgattaaacggtatcgggatttccttggtcaaccagaacttg agggagctcgtgtatatcactttccgcgagatagatctcaagctcagcgaatctaagatc taccagacggtcaacaccactatcaagtggatacaagttgataatcaattatatggcgga atattcccaattcttctatacccaagcgttgtcccgaaaactggtagggagatggaggcg catccaattttcacagctacggttacccgggttaaagatgactcatacggagtcttgtat gtgaagtatgcttcactgcttgttcagcagatgactcttgaactcgatgaagacttcatt tttgccctcctcgactttgtgaaggttccaggcgcctcttggtccgaggaacgtgaggac cccatttgtgaggctgaacttggtattccggaaccaaaacacgaagcacaaggacaggac gtgtattttgaggtccttcacttgcatcctatgcagcttgatctgtccttcgttcgtaca gaacgagtcaatgttgaggatacgacagagtcgtctaacccattgatgttcttcgtcaac gtcatgactatgtcaataggtaacgttaatgatgctccggttagattaaacgcactgctt ctggagaacgcaagagtatctatcccgatgcttgtttcgaatatcacaaaccactatact caggaattccttcgtcaggtccacgttgttatcggctctgcggatttcctaggtaatccc gttggtttgtttaacaccgtgagttccggagttgccgatatattctatgagccatatcaa gggttcgttatgtccgacagacctcaggagctaggcctcggaattgccaagggtgccact tcattcgtcaagaagtcggtgtttggaattacggatagtcttacaaagttcacgggaagt gtctccaaaggtctcgctgccgcaacactggataaagagtttcaggatcaacgaaggatg tctagagcccgaaatagaccaaagcatgctctttacggagtgactgcaggaggcagtgct tttgccaccagcatggcaagtggaattggtggtcttgcgcgtcatccactggagggtgct gaaaaagaaggattccaaggttttgttaaaggtgtcgggaagggcttcttaggacttgca acaaagccagcactcggtgcttttgatctagcttccattttcgatgccgggggccttgac cgagttcgtttaactcgctttattggtcgaactggaattgtcaaaccgtattctcagcga gaagcactaggccaattctggctcaaaacgacggacgatggcaaatacttcaacgaggaa tatattgctcatctggagttccctggaaaagatatgcttgtgttattgacatataatcga attatgcttgtccgatcaaagcgtctcacaacagaatgggacatcaaattgaccgatatt caaaagatatcgaaggagagaacgggaatgaccataacgctaaagggcggcaccaacgga ccattcataccggtacaagatgagagtggaagaaactggttctacaaacaaattgctatt ggtatgtttacttatcatcgtttctcccggcaagttgagcatattcagtaa

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