KEGG   Trichophyton verrucosum: TRV_04927
Entry
TRV_04927         CDS       T01615                                 
Name
(RefSeq) hypothetical protein
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
tve  Trichophyton verrucosum
Pathway
tve03020  RNA polymerase
tve03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TRV_04927
  09124 Replication and repair
   03420 Nucleotide excision repair
    TRV_04927
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tve03021]
    TRV_04927
   03400 DNA repair and recombination proteins [BR:tve03400]
    TRV_04927
Transcription machinery [BR:tve03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     TRV_04927
  RNA polymerase III system
   RNA polymerase III
     TRV_04927
  RNA polymerase I system
   RNA polymerase I
     TRV_04927
DNA repair and recombination proteins [BR:tve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      TRV_04927
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 9577818
NCBI-ProteinID: XP_003020966
UniProt: D4DCS2
LinkDB
AA seq 146 aa
MSDPILFEDTFSITSINAQKYDRVSRISCTSTDHLITFTLDVNTEIYPCAPGESLSLALA
STLALDGKEEATGERAVWRDVGMGENTLANDYDYVCYGKVYRFEESSTAGNMAVFVSFGG
LLLYLDGPYNKLSPLKIDYVYLLMKK
NT seq 441 nt   +upstreamnt  +downstreamnt
atgtcggatccgatcctgttcgaagacaccttcagcatcacctcgatcaacgctcagaaa
tatgaccgtgtctcgcgcatcagttgtacgtctacagaccatctgatcaccttcaccctc
gatgtgaacacggaaatctatccatgcgcccccggagagtcgctgtcgctggctctggcg
tcgacattggcgctggatggcaaggaagaagcaaccggtgagagggctgtatggagagac
gtaggcatgggggagaacactctggcaaatgactacgactatgtctgctatggaaaggtt
tacagatttgaggagagcagcacggcgggcaatatggctgtcttcgtctccttcggcggt
cttttgctatatcttgatgggccatacaacaagctcagcccacttaaaattgactacgtc
tatcttctcatgaagaagtag

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