KEGG   Trichophyton verrucosum: TRV_05203
Entry
TRV_05203         CDS       T01615                                 
Name
(RefSeq) hypothetical protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
tve  Trichophyton verrucosum
Pathway
tve03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tve00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    TRV_05203
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tve03021]
    TRV_05203
   03019 Messenger RNA biogenesis [BR:tve03019]
    TRV_05203
Transcription machinery [BR:tve03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     TRV_05203
Messenger RNA biogenesis [BR:tve03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     TRV_05203
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_2 zf-CCCH_4 zf-CCCH_9
Other DBs
NCBI-GeneID: 9577376
NCBI-ProteinID: XP_003020677
UniProt: D4DDJ2
LinkDB
AA seq 251 aa
MAEVQRIADRIVSPGTPRDPNFTKFAFSDFVAKSFSFALASDVPVCKAYREGHCPLGPLC
AERHPTPSRISTSSSPAIAPSSTHGSLVCKHYLKGLCKKGLKCEYLHEYNLRRMPECQSF
SRNGFCPNGDDCLYQHLSGDAKLPQCEHYDQGFCPLGPICAKRHVRRKLCRFYLAGFCPA
GKTCTEGAHPRWSENLPKPTVRVEKTQEEIESERARIREEQEREEEREREWRRENRGRDG
RYPRGRYRGKR
NT seq 756 nt   +upstreamnt  +downstreamnt
atggccgaagtccagagaatcgcagatcgaatagtctcgcccggaacgcctcgagacccc
aatttcaccaagtttgccttttcagacttcgttgccaaatcctttagctttgcccttgct
tccgatgtaccggtttgcaaggcctaccgtgaaggccactgtccgctcggcccgctgtgt
gcagagagacacccgactccatctcgcatatcgacctcttcgtctcccgcgatagcccct
tcgtccacgcatgggagtctggtatgcaagcattacctcaaggggctgtgcaagaaaggg
ctgaaatgcgaatatctacacgagtacaacctgcggcggatgccagaatgccagtccttc
tcccgtaacggattttgtcccaacggggatgactgcctgtatcagcatctctctggtgac
gcaaagctgccgcagtgcgaacattatgatcaagggttctgtccgttgggtcctatctgc
gccaaacggcatgtgaggaggaagctgtgtcggttttatcttgcgggattctgtcctgcc
gggaagacgtgtactgagggtgcccatccgcgctggtcagaaaacttgcccaaaccgacc
gtcagagtggaaaagacgcaggaggagattgaaagcgaacgagcaaggatcagagaggaa
caggagcgggaggaagagcgggagagagagtggaggagagagaaccgtggccgagacggc
agatatccacgaggacggtatcgggggaagagatga

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