Trichophyton verrucosum: TRV_05516
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Entry
TRV_05516 CDS
T01615
Name
(RefSeq) pre-rRNA processing protein Utp22
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
tve
Trichophyton verrucosum
Pathway
tve03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TRV_05516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tve03009
]
TRV_05516
Ribosome biogenesis [BR:
tve03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
TRV_05516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D2
Nrap_D5
Nrap_D4
Nrap
Nrap_D3
Nrap_D6
Fibroin_P25
Motif
Other DBs
NCBI-GeneID:
9584124
NCBI-ProteinID:
XP_003020398
UniProt:
D4DEE9
LinkDB
All DBs
AA seq
1086 aa
AA seq
DB search
MSGPTLKRRKLSSGEEEDSANTSKKPKSPAVQRNGRPSNSAAEYALARGQFKSSMFKLQM
DELLGQLRPDYDKLLSRVEKSLRKLKTVIEEIPNGNPKTLAEAKKEFESSKVAIPFPEPP
PAKDVRYTFEYSKPVDINVVGSFALKTMAKGQGPTYIDLAVTLPSTLFHKKDYTSYRYFY
KRAYYLARIAAAIKTAEDVDFSISYTYQDGNTLRPVLLLQPADGAEDDFSRSNCVIRIIT
AVEKDTFALSHTFPSHNSLRLDSEAEHKSIGANSTHIYNASLRSEAVVSAYLKLHHSAGV
KCAAFKDSCILGRAWLRQRGFGTSFASGGFGHFEWATVLALLLEGGGPNGKPVLAPSYSS
YQIFKATLQFLSGKDLTKPLLMHAPEGLGTVADTGFPGLFDGKRGLNILYKMTPWSYKLL
QREATLTLKMLNDSTRDHFDSIFITKVCDAFYRFDQVISITLPGRRPPTIQAAERLQSLH
RVLTKALGDRATAIDLTSGEVPSWAVKSTSPPKESKKWTIIAGLNLDASNQGRSIDHGPS
VEDKEESAAFRDFWGDKAELRRFKDGSIKESLVWSDQASSGTPVQQILTYILHHHFKVTP
ENIVYMAADIGQAIPGISNALSTTPASEPVLEAFQKLERHFQSDESLPIAFSQLLLATPF
IRCSPDSPGAPMDAVLLFQSSSRWPDDLGSIQMTKVALLLKVEESIRKADGVIEARVGTE
NNESNLLNTSFLEIHYSPFIIFRLRIHHEPEQAIIQAQLKSKDLPARKKEELAVALAAYK
ATFLQAPRHAQALQSLSNRYPLLPIAIRMLKSWIGAHLLAPFVREELLELLTCQIFLASY
PWDAPSNAFTAFLRTLHMLSKWDWQHEPLIVDFSGELESQDFTDIRTRFEAWRKIDPVMK
NVALFAASNIDPDGVTWTQHSRPSRIIASRMVMLAKAASKLVREKGVDLEVGELFRSPLD
DYDFLLHLSPSFFSDRSKKAAFKNLHDSALTSEYAKHEMVRDLVAELSSLYGEHILFFRG
HASEKVIAGLWNPQTTKTQPFGLKIGFSSYPKKTQDREEVALNKRAILNEIASIAGDIIS
KVQVLH
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtcctactctgaagcggaggaagctgagctctggagaggaagaagacagcgcc
aacacgtcaaagaaaccaaagtcacccgctgtccagcgcaatggacggcccagcaactct
gccgccgagtatgcactcgcgcgtgggcaattcaagtcgagcatgttcaagcttcagatg
gacgagctgctcggtcaactgcgccctgactatgataaactcctttcccgagtcgagaag
agcttgcggaagctgaagaccgtcatcgaagagatcccaaatggcaacccgaagaccctc
gccgaagcgaagaaggaattcgaatcctcaaaggttgcgattccgtttccggagcctccc
ccagccaaggacgtccgatatacctttgaatatagcaagccggtggatataaacgttgtg
ggaagctttgcgcttaagactatggcgaagggacaagggcctacctacattgatttagcc
gttacattaccctccacgctgttccacaagaaggattatactagctatcggtacttctac
aagagagcatactaccttgctcgcattgcagcagccatcaaaaccgcagaggatgtggac
ttttctatcagctatacataccaggacggaaatacccttcggccggtccttttactacag
ccagcagacggcgcagaggatgacttttcacggtcaaattgtgtcattcgtatcataact
gcagttgaaaaggatacattcgccctttctcacacttttccgtcgcataatagccttcga
ctcgacagcgaagctgagcataaatcaattggcgccaattctacgcatatttataacgca
tctttgcgttcagaagccgtagttagtgcatacctgaaactacaccactccgccggtgtc
aaatgcgctgcattcaaagattcatgcatcctgggccgggcctggcttcgtcagcgaggg
tttggaacttcttttgcttcaggcggattcggtcactttgaatgggccactgtccttgct
cttctcctagagggcggtggtccaaatggaaaacctgtacttgctccaagctacagcagc
tatcagattttcaaggcgactctccagttcctctccggcaaagatcttacgaaaccactt
ctgatgcatgccccagaagggttaggtaccgtggctgatactggcttccccggtcttttt
gatgggaaacgaggcttgaacatcctatataagatgacgccttggtcttataaactcctc
cagcgcgaggctaccttaacccttaagatgctaaatgactcaactcgcgatcatttcgac
agcatttttatcacaaaagtctgtgatgccttctacaggttcgaccaagtcatatccatt
acgctacctggacgccgcccaccaacaatccaggcagccgaacgacttcagtccctgcat
cgagttttaacaaaagctcttggggatagggccacagcgatagacctcacctcgggtgaa
gtaccgagctgggctgtcaaatccacctcaccacccaaggagagcaagaaatggaccata
attgctggattgaacctcgatgcatctaatcagggtcgcagtattgaccatgggccttct
gtcgaagataaggaagaatcggctgctttccgagacttctggggtgataaagccgaacta
cgccgattcaaagatggcagcatcaaggagagtttggtgtggtctgatcaggcctcttct
ggtacccctgttcaacaaatattgacctatattctccatcaccacttcaaagtcactccc
gagaacattgtgtatatggcagcagatattggccaagctatccctggcatatctaatgcc
ttgtcgaccacaccagcctccgaaccagtcctggaagctttccagaagcttgaaaggcac
ttccagtccgacgagagcctccccatcgctttcagtcagctccttctagccactcccttt
attcgatgctcacctgattcacctggagctcctatggacgcagtccttctattccaatcc
tcttcccgttggcccgatgatctaggctcgattcaaatgaccaaggtagctttgctcctc
aaagtagaagagtcaatccgcaaagcagacggcgttattgaagccagagttgggacagaa
aataacgagagcaatctactaaatacttcgttccttgagatccattattctccgtttata
atattccgtttacgcatccaccatgaaccagagcaggctatcatacaagcccaattgaag
agtaaggatttacctgcaagaaaaaaggaggaacttgctgttgctctcgccgcctataag
gcaactttcctccaagcccctcgccacgcccaggcactccagagcctctcaaaccgttac
ccactactacctatcgctatcaggatgttgaaatcttggataggcgcccatcttttggct
ccattcgtgcgtgaagagctccttgagctcctaacgtgccaaatattccttgcctcttac
ccttgggatgccccttcaaacgcatttacagctttccttcgaactctacatatgctgtct
aagtgggattggcagcatgagcccctcatagtggactttagcggcgaactcgagagccag
gacttcacagatatccgcacccgcttcgaggcatggcgaaagattgacccggtaatgaaa
aacgttgctctctttgctgcctcgaatatcgacccggatggtgttacgtggacacagcac
agtcgtccatcaagaatcatagcgtctcgaatggtcatgttagccaaggctgcatcaaaa
ctagttagagaaaagggtgtggacttggaagttggtgaacttttccggtcccccttagat
gactacgactttttgctccacctaagtccatcattcttttcggaccgttcaaagaaagcc
gccttcaagaatctccatgactcagccttgacatctgagtatgccaaacacgaaatggtt
cgtgatctcgttgcagagctcagcagtctgtatggagagcacatcctgtttttccgcggc
catgctagtgagaaggtgatagcaggactctggaatccacaaactacaaaaacacagcca
tttggtctgaagattggattttcatcttacccgaagaagacccaggatagggaggaagta
gcattgaacaagagggcaattttgaatgaaattgcatctatagcaggggatatcatttct
aaggtacaggtgctccattga
DBGET
integrated database retrieval system
