Trichophyton verrucosum: TRV_05820
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Entry
TRV_05820 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
tve
Trichophyton verrucosum
Pathway
tve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRV_05820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tve03041
]
TRV_05820
03009 Ribosome biogenesis [BR:
tve03009
]
TRV_05820
Enzymes [BR:
tve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TRV_05820
Spliceosome [BR:
tve03041
]
Complex A
U2 snRNP components
U2 related factors
TRV_05820
Complex B
TRV_05820
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
TRV_05820
Ribosome biogenesis [BR:
tve03009
]
Eukaryotic type
90S particles
Helicases
TRV_05820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
SRP54
AAA_19
Flavi_DEAD
ResIII
AAA_23
nSTAND3
ABC_tran
Motif
Other DBs
NCBI-GeneID:
9583890
NCBI-ProteinID:
XP_003020126
UniProt:
D4DF75
LinkDB
All DBs
AA seq
763 aa
AA seq
DB search
MAARSDSENASRAKRLKTTAESDPRSNPYLAHMYENEDASSGINDESPLAAFRRHETTAE
MANEVESGSVNPFTGKPFSSRYVSILKTRRDLPVHQQRNEFLKLYQESQILVFVGETGSG
KTTQIPQFVLYDDLPQFRGKLVACTQPRRVAAMSVAERVANEMDVKLGEEVGYSIRFEDK
TSSKTILKYMTDGMLLREAMHDHDLKRYSTIILDEAHERTMATDVLMGLLKEVVLRRPDM
KLIIMSATLDAQKFQRYFSDAPLLAVPGRTHPVEIFYTPEPEQDYVEAAIRTVLQIHATE
PEGDILLFLTGEEEIEDAVRKISLEVDEMIREVDAGPMKVYPLYGSLPPAMQQRIFEPPP
PPRKPKGRPGRKCIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKA
SAQQRAGRAGRTRPGKCFRLYTEGAFKKELIEQTYPEILRSNLSSTVLDLKKLGIDDLVH
FDLMDPPAPETLMRALEELNYLACLDDDGNLTALGRLASEFPLDPALAVMLISSPEFYCS
NEILSITSLLSVPQIFVRPVAQRKRADEMKALFSHPDGDHLTLLNAYHAFKGPEAQANPR
QWCHDHFLSLRSLQSADNVRLQLQRIMEREEIELVSTPFEDKKYYENIRRALVAGFFMQV
AKKESQGKNLYRTVKDNNEPVLLHPSTVLGYEAEWVLYNEFVLTTKSFIRTVTAVKGEWL
LDISPAYYDISSFPKGEIRSALIRAGERLSRKEKMRSDASKKR
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcggagtgacagtgagaatgcgtctcgcgccaaaagactaaaaacaacggca
gaatcagaccctcgatcgaacccgtacctcgcccatatgtatgagaatgaggatgcatcc
agtgggataaacgatgaatcacctctcgcagctttcagaagacacgagacaaccgcagag
atggcgaatgaggttgaaagcggcagtgtgaaccctttcacaggcaaaccgttttccagt
cgatacgtatccatactcaagacccgtcgcgatctcccagtccatcagcagaggaatgaa
ttcctcaagctctatcaagaatcgcaaattcttgttttcgttggcgaaactggttcagga
aagactacacaaattccacaattcgtgctatacgatgatcttcctcagtttcgaggaaag
ttggttgcctgtacacaaccgcgacgagttgctgctatgtcagttgccgagcgtgttgca
aacgagatggatgttaagcttggagaagaggttggatatagcattcgattcgaggacaaa
accagctccaaaaccatactcaagtatatgacggatggtatgttgttgcgcgaagccatg
catgatcacgatctcaagcggtatagcaccatcatacttgatgaagctcacgaacgtacc
atggcaacggatgtcctcatgggtcttttgaaggaagtcgtactgcgccgtccagatatg
aaacttattatcatgtctgctactttggatgcacagaagttccaacgctacttttccgat
gcgccattactggcggttcctggaagaacccatccagtagaaatattttataccccagaa
ccagagcaggactatgttgaagccgcgatccgcacggtcttacagattcatgctactgag
ccagaaggtgacattcttttgtttttaacgggagaggaggagatcgaagatgctgttcgc
aagatttctctcgaggtagacgagatgatccgtgaagtcgatgctggaccaatgaaagtc
tatcccttgtatggttctctacctccagccatgcaacagcgtatattcgagcccccgccg
ccgccccgaaaacccaagggaagacccggaaggaaatgcattatatccacaaacattgca
gaaacctcacttaccatcgacggtattgtgtatgtggtagatccaggattttctaagcag
aaagtatacaacccacgtattcgtgtggagtctctgcttgtatcccctatctcaaaggcc
tcggctcaacaacgtgctggtcgtgctggtcgtacccgacctgggaaatgtttccgtctc
tataccgaaggcgctttcaaaaaggaacttatcgagcaaacgtatcccgaaattcttcgc
tcaaacttatcttctacagttctggacttgaagaagcttggtatcgacgacttggttcac
tttgatctcatggatcctccagctcctgaaaccctgatgcgagccttagaagagcttaac
tacttagcatgtctagatgacgatgggaacctcactgctcttggtcgattggcctctgag
tttcctttggaccctgccctggctgtgatgctgataagctctccagagttctactgttcc
aatgaaatcttgtctattacttccttactttcagtgccccaaatctttgttcgccctgtt
gcacagcggaagcgtgcagatgaaatgaaggcgctattttcccatccagatggcgatcat
cttactctacttaatgcctatcatgcattcaagggaccggaagcacaagctaaccctcgt
caatggtgccatgaccatttcctctccctacgatctctgcagtccgccgataacgtccga
ctacagcttcagcgtataatggaacgggaggaaattgaattagtctctaccccatttgaa
gataagaaatattacgaaaatatccgccgcgcacttgtagctggatttttcatgcaggtt
gcgaagaaagagagtcaagggaaaaacttgtatcgcactgtcaaggataacaatgagcca
gttttattgcatcctagcacagttttgggatatgaggctgagtgggtcttgtacaatgag
tttgtcttgactacaaagagctttattagaactgtcaccgcagttaagggagaatggcta
ttggacatttctcctgcgtactacgatatctctagtttcccgaaaggagaaattcgatcc
gcattgattcgagctggcgaaaggttatctcgaaaggaaaagatgcgatctgatgcgagc
aagaaaagatga
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integrated database retrieval system
