Trichophyton verrucosum: TRV_05851 Help Entry TRV_05851         CDS       T01615                                  Name (RefSeq) hypothetical protein   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism tve  Trichophyton verrucosum Brite KEGG Orthology (KO) [BR:tve00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tve03021]     TRV_05851 Enzymes [BR:tve01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      TRV_05851     5.6.2.5  RNA 5'-3' helicase      TRV_05851 Transcription machinery [BR:tve03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      TRV_05851 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel UvrD-helicase AAA_19 AAA_30 Viral_helicase1 DEAD zf-CCHC ResIII CEP104-like_TOG nSTAND3 T2SSE Motif Other DBs NCBI-GeneID:  9583842 NCBI-ProteinID:  XP_003020078 UniProt:  D4DFA5 LinkDB All DBs AA seq 2139 aa AA seqDB search MYWLTFDLLFRIRELKSLPEELHLLCPRKNDNDMEQYNKYTESENKSSEAGAQTNPDILE RISEAAVRREKFLSCIQLLAFSGEEVEAQQQWIWRRLKETLERCDICIKEYYRGKIWLIG TLGESYDESEVEKFSKMLDDWDIARVGKNLDKAASMLASISPGQRKISALDRASMLSIFE ALSSTPVLGNETFLCEHFDKPFTMVQSSRALKITEYVPAATQFLFDKNKHRNDWAVFTWS KLARPPTTTEFDCAIKEPLLAALRRASTPPFDPDFVDSLWRGVTIIIKGLNKDQITHNLR GLELDPCRLSVDHLAIQAPALRSVINTIHALLKKSPNDFWDAMQTISPQAIIEQIFYNPQ FEVFLTATDNNDSLTESPLRDMLSWIDPFIMSLKNTHQPQACRFLVHQLLNRLQEPRFPT IVKYHCFRSGLMVLYRTLRSFTDNEDSRGSVATIVLSEMMEVISDNIKHFLNPPRFEVDG SEGEISILCMDVVRNTLALECQSLKSDYETILRDNTLQHGVSTYTAPIWDAVVQHLDEKN LALSSAALRGILPLVGLEKFQTRGENTKEKTHFNVIYGHLTHLACQILERLSDFRPEHLD ELFKAQETNGSLTSALFSADLNTYQAAVDLIKAVSGQLGRKEAISHLLQSFCASTMFGFS WSFRRISNMKTFASAPRMLKTGTDIIEVLCDSQTGILRTRKLNDPKEVYFLQRLWEYQWL ALSTIFSHTEKWHRMGVDRSIMLEFCRDSIQFAELLFDQFPIFATAVGEADPAQANSAKS NLLRYPTTTMNAMVKWLRLKDEYLATTLVGIVSKVLRRLGDLNATVQEEALDVIKDVALT AKIKTILTDSEKAELVRSMEAYYKKPLITPIPAPPPKKKQSSITAFAKPVDPNTIVKSES KPIKEEGHESEIDIPDDVLIELSGSIDLHKARIASQKPIPRPAAPYKPLPPVAPLAKPAH NVLSFREKREREKEAKKKRDMIELAKVKKNLPLRGMSEQTASQGSGLSGLNIGVVEHKPA DSMMVSSDSDSDSDSDDNGDEDMVGKRVSSKPDAVRAYEESRKKLLQRVPFKKAKIIRSA KDMRARLAPDLSSLHKTLLSWDFFATTVLPPNCGRTDYTLVSNVFANALEYQKTFEPLLI LEAWQGFQTAREDATFKEFEIKVANRLSVDSFVEVSTIMEPQQVKDLGLGEADLVLLSRS NKPATDSSAPHCLGRISGIKKKKGTVEVSYRINPSGPMASGIGPGGGLFGVKITSLTPLE REYGALMALQYYDLSEEIIRAKPSPILNYGPENLKTILATYDLNPAQAKAIKSAVDNDAF TLIQGPPGSGKTKTIVAIVGALLTPILAERKVPQPKIASDSAQASKSAPSKKLLVCAPSN AAVDELVMRFKEGVKTLNGKTQPISVIRLGRSDAINANVLDVTLDELVNAKLNQSDQKKN GEERDLQSYFNEHKETSAKFIEIRQRIDQCRTRAEPVSNELEREFDLLKRKKAQLSQAID NARDKNHAAARNAELTRRRIQQEIIDGAHVICSTLSGSGHEMFQSLSIEFETVIIDEAAQ SIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKEASRFQYEQSLFVRMQANHPNDVHLLD TQYRMHPEISKFPSQAFYDGKLQDGPGMAPLRKKPWHGSELLGPYRFFDVQGMHSSAAKG HSLVNIAELTVAMRLYERLVADYRNYDFAGKIGIITPYKGQLRELKSRFAAKYGSSIFTA VEFNTTDAFQGRECEVIIFSCVRASDRGIGFLSDIRRMNVGLTRAKSSLWVLGNSQSLVR GEFWRALIHDARERQLYTEGDILRILQKPQISLDMELNNVEMVDAPAEVGNIPTPSSRPG SSMAGSSNSRPPSRLSNPQSAAESLPSELPSGSAVGTPIPCLPDGPSGGKSGLNDLAVCG YCGSHQHMTHNCDNIDAKIACQGTCRRCGDETHSIRDCKAERCVQCGETGHLANDCKSTT VLPKWEKNKIIKEEAHHKNMQQARIERQKQKAIAAHDPKIPLIQVPGKKPSAENMAPQHS IGHGKRKRSDLGNPQASSDPKVMRLDQSTASSTPPKDSKGKKQDGSTSAAAQTPAPPPAA NKVGDSTSGPPMRPKGDRRPPPPMRKKKPADVFIRPERR NT seq 6420 nt NT seq  +upstreamnt  +downstreamnt atgtattggctaacgtttgacctcttatttcggattagggagctgaagagcctgcctgaa gagcttcaccttctgtgcccgcgtaaaaatgacaatgatatggagcagtacaacaaatac accgagagcgaaaataaatctagtgaagccggtgctcagacgaaccctgatatacttgag agaatatcagaggctgcggtgcgtcgagagaaatttctctcatgcatacagctactagct tttagtggcgaagaggttgaagcacaacagcaatggatatggagacgcctcaaggagaca ttagaaagatgtgatatttgcatcaaggagtactacagggggaaaatatggctgattggg actttgggtgaaagctacgatgaatctgaagtggaaaaattcagtaaaatgctggatgat tgggatatagccagagtcgggaaaaatttggataaagctgccagtatgctcgcaagtatc tcccctgggcagcgtaagataagcgcccttgatcgagcctctatgctctccatttttgaa gctttaagctctaccccggtgctagggaacgagacgtttctttgtgagcattttgacaaa ccgtttacgatggtacaaagctcgcgcgctctaaagatcacagaatatgtacctgccgct acgcagtttcttttcgacaaaaacaagcatagaaacgattgggctgtgtttacttggtca aagctagccagaccaccgacaactacggaattcgactgtgcaatcaaggagcctttactt gcggctttacgccgagcatccactcctccatttgatccggactttgttgattcgctatgg cgtggagtcactatcataatcaagggactgaacaaggaccaaatcacccataaccttcga ggacttgaacttgatccctgccgattatctgttgaccacctagccattcaagctccagct ttacgctcagttatcaacacgatacatgctctcttgaagaaatctccaaacgacttttgg gatgccatgcaaactatttcaccacaagccattattgagcagattttttacaatccccag ttcgaagtgtttttaacggctactgataataatgactccttgactgaatcccccctgagg gacatgctgtcatggatagatccctttatcatgtctctcaagaatacccaccaaccacaa gcatgtcggttcctagttcaccagcttctcaaccgccttcaggagcctcgatttcctacc attgtcaagtaccattgttttcgaagtggacttatggttctttatcgtaccttgcgtagc ttcacggataatgaagactcgagaggttctgtggctaccatcgttctatccgaaatgatg gaggttataagtgataatatcaagcatttccttaaccctccacggttcgaagttgatggg agtgagggggagatttctattctctgtatggatgtggtccgaaacacattggcactggaa tgccagtctctaaaatcagactatgaaaccatcctcagggataatactctacaacatggc gttagcacatatacagcgcctatatgggatgctgtagtccaacatcttgacgaaaagaat ttagccctctcttctgcagccctgagaggtatcttgcctctcgtaggacttgagaagttc cagacgaggggagaaaacacgaaagaaaagacgcattttaatgtcatttatggccacctt actcatctcgcatgccagatccttgagagattgtctgatttcagacctgaacatctggac gaattattcaaagctcaagagaccaatggttctttgacctctgcattattctccgctgac ttaaatacgtatcaggcggctgtcgatctgataaaagccgtcagtggccagctggggcgc aaggaggcaatttctcacctattacagtcgttctgtgcctccacgatgtttgggttcagc tggtcttttcggcgtatttccaacatgaaaacattcgcctctgctcccagaatgcttaaa actggcacagatatcatcgaggtcctgtgtgattctcaaactggaatactgaggactcga aaacttaatgatccaaaagaagtatacttcttgcagaggctttgggagtatcagtggttg gcactttctacaatattcagtcataccgaaaaatggcatagaatgggcgttgacaggtca atcatgctagaattctgtcgagacagtatccaatttgctgagcttctgttcgaccaattt ccaatatttgccacggccgttggagaagccgacccagcacaagctaactcggcaaagagt aacctccttcgatacccaactaccacaatgaatgccatggtaaaatggttacggctaaag gatgagtatcttgcgactacactggttgggatcgtttcaaaagtgcttcgccgtcttggg gatctaaatgcaacagttcaggaggaggccttggacgtcatcaaagatgttgctttgact gccaaaatcaagactattttgacggatagtgaaaaggcagaactagtaaggtctatggag gcctattataagaaacccctgatcactcctattcctgctccacctcccaaaaagaaacaa agttcgattactgcttttgctaaacccgtggatcccaacacgattgttaaatccgaatct aaaccgattaaagaggagggacatgagagtgagattgacattccagatgatgttttaata gaactatcaggttcgattgatcttcacaaggctagaatagcctctcagaaacctattcct cgccctgccgcaccttataaacctcttccacctgtggcaccattagcgaaaccggctcat aatgtcctttcattccgtgaaaagcgcgagagagaaaaggaggccaaaaagaaacgtgat atgatagagctcgccaaagtaaagaagaacttgcctttacgtggtatgagtgagcagaca gcgtcacaaggctccggcctcagcggccttaatattggagtcgttgagcataaacctgcg gacagtatgatggtgtcttccgactcggattcagactcagacagtgacgataatggagac gaagatatggttgggaagcgggtgtcttcaaaaccagatgctgtgagagcttatgaagaa agccgaaagaaactcctacaacgagtgccttttaagaaggcaaagatcatccgctctgcc aaggacatgcgagcgcggcttgccccagacttatcatctcttcataagacattattaagt tgggatttctttgcaacgaccgttcttcctccaaactgtggccgaactgactacacattg gtttccaacgttttcgcaaatgcactggagtatcaaaagactttcgagccattactgata ctagaagcctggcaaggcttccaaactgctagagaggatgcaacatttaaagagttcgaa atcaaagttgcaaaccgtctttcagttgactcatttgtggaagttagcacaattatggag cctcaacaggttaaagacttgggcctaggggaagctgatttggttctgctatcccgctca aacaagcctgccactgattcgagtgcacctcattgcctaggtaggatatccggaatcaag aagaagaaagggacagtggaggtatcctatcgcattaatcccagtggcccaatggctagc ggaattggacccggaggcgggctgtttggtgtaaagatcacctctcttacaccccttgaa cgtgaatatggagcactcatggctctccaatattatgacctgagtgaggagattataaga gcaaagccatctccaatattgaactatggcccagagaatttgaaaaccatactggccaca tatgacctcaatccggcgcaagccaaggctattaaatcggctgtggataacgatgcattc acactaatccaaggacctcctggttcaggcaagaccaaaaccatagttgcaattgttgga gcgcttctaacgcccattctggcggaacgaaaggttccccaacccaaaatagccagcgac tcagcacaggcgagcaagtcagccccatcaaagaaactgctagtttgcgcgcctagcaat gcagctgttgatgagctagtgatgaggtttaaagaaggggtgaagacactcaacggcaaa acacaaccaatctctgtcattcggttaggtcgaagcgatgcgatcaacgccaatgtgctg gatgttacgctagacgagcttgtcaatgccaagttgaaccagagtgatcaaaagaaaaat ggagaagagcgtgatttacagagctatttcaacgagcacaaggaaacctctgccaaattt attgagatacggcagagaattgatcaatgcaggacgagagcagagcccgtctctaacgag ctcgaacgagaattcgatcttctaaaacgaaagaaggctcaactaagtcaggccattgat aatgccagggataagaaccatgccgcagcacgaaatgctgagttgactcgacgacgaata caacaagaaatcattgacggagctcatgttatctgctccacccttagcggcagtggacat gaaatgttccaaagtctaagtatcgaatttgagacagttatcatcgacgaagctgcccag tctatcgaattgagtgctctcattcctctcaaatatggttgctccaagtgtgttctagtt ggagatcccaaacagctgcctccaacagtgttatcgaaggaagcatctcgattccaatat gaacagagtttgttcgttcgaatgcaagcaaaccatccaaatgatgtccatcttctcgac acccaataccgaatgcatccggagattagcaaattcccaagccaagcgttctatgatggg aagctacaagatggacctggaatggcgccattacggaaaaagccctggcacggaagtgag cttcttgggccatatcggtttttcgatgtccagggcatgcactccagtgctgccaagggc cattctttggttaacattgcagaacttacagtagcaatgcgcctctacgaacggcttgtg gctgactatagaaattatgattttgcggggaagattggcataatcacgccttacaaaggc cagctgagggagctcaagagtcggtttgctgctaaatatggcagttcaatattcaccgct gttgagtttaataccacggacgcattccaaggaagggagtgcgaggttatcatattttct tgtgtccgagcatctgaccgaggaatagggtttttgtccgatattcgtcgaatgaatgtt ggattgacacgagccaagtcgtcgctttgggttcttggaaattctcaatctcttgtccga ggtgaattttggagggcgttgatccatgatgctcgagaacgccagctttatactgaggga gacatcttacgaatcctgcagaaacctcaaatcagcctggatatggaattaaataacgtc gaaatggtagatgctcctgcagaagttggcaatatcccaactccttcatcaaggccaggt tcatctatggctggaagcagcaactctaggccgccttccagactgtcaaatccccagtcc gccgccgaatcattgcccagcgaactgccctcaggtagtgcagtgggcacgcccatccca tgccttccggatggcccttccgggggtaagtctgggctaaatgacttggctgtgtgcgga tattgcggaagccatcaacatatgacacataattgtgacaatatcgatgccaagatagcc tgtcagggcacttgtcgaagatgcggagatgagacgcattcaattcgggattgcaaagct gaacgctgcgttcaatgcggagaaaccggccatcttgcaaatgactgcaagtccacaacg gtgctacccaaatgggaaaagaataaaatcatcaaagaagaagcccatcacaagaacatg cagcaagcgagaatagaaaggcagaagcagaaggccattgcggctcacgacccgaaaata ccactaatacaggttcctggaaagaaaccttcagctgagaacatggcccctcaacatagt attggccatgggaagaggaaacgatctgatttgggcaatccccaggcttcgagtgaccca aaggtaatgcgacttgaccagagcactgcatcttcgactcctccgaaggattccaaggga aagaaacaagacggcagcacctccgccgcagcacagacaccagctcctcctccggcggcc aataaggttggtgactctaccagcggtcctcccatgaggccaaaaggcgacagacgacct cctcctccaatgcgcaaaaagaagcctgcagacgtctttattcgtccagaacgcaggtaa

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