KEGG   Trichophyton verrucosum: TRV_06114
Entry
TRV_06114         CDS       T01615                                 
Name
(RefSeq) hypothetical protein
  KO
K10885  ATP-dependent DNA helicase 2 subunit 2
Organism
tve  Trichophyton verrucosum
Pathway
tve03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tve00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    TRV_06114
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tve03400]
    TRV_06114
DNA repair and recombination proteins [BR:tve03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     TRV_06114
SSDB
Motif
Pfam: Ku_PK_bind Ku Ku_N
Other DBs
NCBI-GeneID: 9584577
NCBI-ProteinID: XP_003019826
UniProt: D4DG12
LinkDB
AA seq 675 aa
MWTKSKDNSYKNISIFKEIGQYVFVKPRGLDGSNTSLRALMPDLKELRSLIKPSNTDNGD
AISSIILAIDMITKYCKKLKYKRKIVLVTNGKGPMDLDGMDTIAGKIREEGIELVILGVD
FDDLDFGVKEEDKDAVKAENESSLQKLCDVCDGVYGTLEQAISELDTPRVKVVRGIPSFK
GDFKLGDPDKYDSALTIQVERYFRTYAARPPPASSFVLSGAPPEVQETGDSSANLKDART
DTGKSISNELTSVRNARSYQVTDSGVVGGKRDVERDALAKGYEYGRTAVHITDSDENITK
LETKAALEIVGFIPIENVCFIIKSILIIYKLPFTDYVLIRTNNKAIIALSSIINALHEVE
SYAVGRLVTKDGKSPTLVLLAPSIDPDYECLLEVQLPFAEDVRCYRFPPLDRVTTMSGKV
VKEHRNLPNENLLAAMEKYVENMELVQPGEEGVDQAIRWRAIHPTKPLPPIPKVLQKQSR
QPDELMEQSKSALEQLIKASDVKKVPPKVKGRKRNRITDKPLSGLDVDALLQGEKRQRIS
PENAIPEFKQALANTDDINTVKKSVKQMCAIIENQIKHSLGDANYDRVVEYIGTMRDELI
SFEEPDLYNDFIRELKRKLLDDKLGEDRRELWWLIRKKRIGLIDDKLVEISKVTEQEAKE
VCIYPIPTRIFAVTN
NT seq 2028 nt   +upstreamnt  +downstreamnt
atgtggaccaaatccaaagataattcgtacaaaaatatatcaattttcaaggaaattggc
cagtatgtcttcgttaagcctagagggttagatgggtctaatacttctcttagagctctc
atgcctgatcttaaggagcttcgaagcttgattaaacccagcaatacagataacggcgat
gcaatttcttcgattatattggcaattgacatgataaccaaatattgcaagaagcttaaa
tacaagagaaaaattgtccttgttacgaacggaaaggggcctatggaccttgatggcatg
gacactattgcaggaaagataagagaagagggtattgagcttgttattctcggggtggac
tttgatgaccttgacttcggcgttaaagaagaagacaaggatgcagttaaggccgagaat
gagtcttcacttcaaaaactatgtgatgtctgtgatggtgtctatggtactttggaacaa
gcgatatccgagcttgataccccacgtgttaaggttgtgcgaggaatacccagttttaaa
ggggatttcaaactcggagacccagacaagtatgattctgcactaacaatccaggtggaa
aggtactttcgaacgtatgcggcccgaccaccacctgctagttcattcgtattatctggt
gcacccccagaagttcaggaaactggagattcttcagcaaatttgaaggacgcgagaact
gacactggaaagagcatctcaaacgaactaacaagtgtcagaaatgcgcgatcttaccaa
gtcactgacagtggagtagtgggcggcaagagagacgtggagcgtgatgcccttgcaaaa
ggatacgagtatggccggacggcggtgcatatcactgactcggacgaaaatataacgaag
cttgaaacaaaggctgcgttggagatagttggatttatcccaattgaaaatgtctgtttt
atcatcaaatctatcttgataatatacaaattgcctttcactgactatgttctaataagg
accaacaacaaagctatcatcgctctttcctccattataaatgctcttcacgaagtcgaa
agctatgccgtgggacggctagttactaaagatggcaaatctcctaccttagttttgtta
gctccttcaattgaccccgactatgagtgcttgcttgaggtccagttaccgtttgcagaa
gatgtccgctgttatcgtttcccacccctggatagggttactaccatgtccggaaaagtt
gtcaaggagcatcgaaacctgccaaacgaaaatctcttagcggctatggaaaaatatgtg
gaaaatatggagcttgtccagcctggagaagaaggggttgaccaggccattcgatggcgt
gctatccatcctactaagccacttcccccaatcccgaaagttctccagaaacagtcccgt
caacctgacgagttgatggaacaaagcaagtcagcattggagcaactaatcaaagcatct
gatgttaagaaagttccaccaaaggtgaagggccgcaaaagaaataggatcaccgataag
ccactctctggactggacgtggatgcccttctacaaggcgaaaagcgccaaagaatttcc
ccagagaatgcaatacccgaattcaaacaagcgcttgcgaacacggatgatatcaatacc
gtcaagaagtctgtaaaacagatgtgcgcgattattgagaaccaaatcaagcacagcctg
ggcgatgccaactatgacagagtcgttgaatacataggaaccatgagggatgaactgatt
tccttcgaagaaccagatttatataacgattttattcgcgaattaaaacggaagttgctg
gatgataaattaggcgaagataggagagagctttggtggcttattcggaagaaaaggatt
ggcctcatcgatgacaagctggtagagatatcgaaggttacagaacaagaagcgaaggag
gtatgcatatatccaatcccaacccgcatatttgctgttacaaactaa

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