Trichophyton verrucosum: TRV_06435
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Entry
TRV_06435 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
tve
Trichophyton verrucosum
Pathway
tve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRV_06435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tve03019
]
TRV_06435
Messenger RNA biogenesis [BR:
tve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TRV_06435
mRNA degradation factors
3'-5' decay
Pan complex
TRV_06435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
PH_CERLI1
Motif
Other DBs
NCBI-GeneID:
9578335
NCBI-ProteinID:
XP_003019561
UniProt:
D4DGY0
LinkDB
All DBs
AA seq
798 aa
AA seq
DB search
MASIAKPGLEDGRRTNGSPKLKGRVVENAKDTLCRNVTIYGRCRYEDKGVQLDRLRSLAR
QQTSPAQPDPNSQTLPLKATMDSSCLASSSSGAGVKQKRLNVESPSFTPSTTPNNGTAPT
SAVTAKKPATLSPKAAGAAPFLPKGSLSRANSGISQLRQETGTPEWGLTDVPDFVPQRFD
TVVCCLFQFQLIIGTGPFTKVLIAQDSMQATNNGVLATGNAYDPFVSTTTPLATAGAVVT
HPLQPNPYAHDHTGIGPTSYFTAQSTFQQPAQYHLYAPIGPHNQNILGYQRNVHDLFIPN
DFREELQKKAAATLQTLPSTFINCYILFRVCFTDCWLDSQLPTQIDHFHSLVPLDVTHQK
NATIFGYPSWVYKAQSSKDGNYYVLRRLEEESKANFFKRLPVNKRKGNQMRAGMEKGHLC
QRGDGARCLYQPQLPGQLPDLRDGLPPAVQDAGRAAPGKPHAVPEPAREHACNRACALGA
IHSAGLAARVIDASKILLTGKNRIRLNACAILDVVQHDTQRSIADLQSNDMVSFGQLILT
LGASSLAHNPTKALEHFSRAYSAQLYNSVLWLLGAGPSKEPQGQLQPANQSQNPNANANP
NANQGSDRTIDVFITGISTQLISTFDSSLHVDDELTHDLSRELENARLVRLLTKLNFITE
RPEYDHDRHWSENGERYFLKLFRDYVFHQVDSQNAPVVDLGHVLTCLNKLDAGSEEKVTL
ISRDEQSCFVVSYKELKKGVEMSFQALMKRREEWVDGWMAVGIWQLFVLYISDPPGTDLA
FDSASAYIKNESTTYQYH
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaatagcgaaaccgggactcgaggacgggagacgtaccaatggctctccaaag
ctgaaagggcgcgtggtagaaaacgcaaaggatacgctctgccgcaatgtgacgatctat
ggcaggtgtcgatatgaggataaaggtgtgcaactcgaccgtcttcgttcacttgcaaga
caacagaccagcccagctcagcccgaccccaactcacaaaccctccccctgaaagccacg
atggatagctcatgtctggcctccagtagcagtggtgccggcgtcaagcagaaacggttg
aatgttgagtcgcccagtttcactccctcgaccacgccgaacaacggcacagctccgacc
tcagcagtcacggcgaagaagccggctacgctgtctccaaaggctgccggtgcagcgccc
tttcttcccaaggggtcactctcacgtgcaaactcgggaatatcacagctacgtcaggag
accgggactccggaatggggtttgacggatgtacctgactttgtgccacagcggtttgat
actgtggtatgttgcctatttcaattccagcttataatcgggacggggccgtttactaag
gtactaattgcgcaggactcgatgcaggccaccaacaacggtgtcctggccactgggaat
gcatatgacccctttgtctcgacgacgactccgctagccactgccggagcggttgtcaca
cacccgcttcaaccgaacccttacgctcacgaccacaccggcatcggtcccacctcatat
ttcaccgcccaaagtacctttcagcaaccagcacaatatcatctctatgccccgattgga
cctcataaccaaaacattcttggatatcagcggaatgtacatgacttatttatcccgaat
gactttagagaagagctgcaaaagaaggcagccgcaacactacaaacccttcctagtacg
tttataaactgttatattttattcagagtttgttttactgactgctggttagactcccaa
ctacctactcaaatcgaccactttcactctcttgtgccgcttgacgtaacgcatcagaag
aatgctactatcttcggctaccctagctgggtatataaggcacagtcaagtaaagacggc
aactactatgtgcttcgaaggctggaggaagagtccaaagctaacttcttcaaaaggctt
ccggttaacaaacgaaaaggcaatcagatgcgtgcaggcatggaaaagggtcatctctgc
cagcgtggtgacggtgcacgatgcctttaccaaccgcagcttccaggacagctccctgat
cttcgtgacggactaccacccgctgtccaagacgctggccgagcagcacctggaaagccc
cacgcggtaccagaaccggcacgcgagcacgcatgtaacagagcctgtgctctgggggcc
atccacagcgccgggctggccgcacgggtgatcgacgccagcaaaatactgctgacgggc
aaaaatcgcatccgccttaacgcctgtgccatcctggacgtggtgcagcacgacacccag
cggtccattgcggaccttcaaagcaacgacatggtcagcttcggccagctaatactcaca
cttggagcgagctcgttagcgcacaaccctaccaaggcgctagagcacttctcccgcgcc
tacagcgcacaactgtacaactcggtgttgtggctgctaggcgccggcccatccaaggaa
ccccaaggccaactccaacccgccaaccagagccagaaccccaacgcaaatgcaaacccg
aatgcgaaccagggctccgaccggaccatcgacgtgttcatcaccggcatctcgacgcag
cttatctcgacctttgactcatccctgcacgtcgacgacgagctaacgcacgatcttagc
cgggaactcgaaaacgcgcggctagtccggctgctgaccaagctcaacttcatcaccgag
cggcccgaatacgaccacgaccggcactggtccgagaacggcgagcggtacttcctgaag
ctgtttcgggactacgtgtttcaccaggtggacagccagaatgcacccgtggtcgacctg
ggccatgtgctgacgtgtctgaacaagcttgacgcgggaagcgaggagaaagtgacgctg
atcagccgggacgagcagagctgttttgtagttagctacaaggagctgaagaagggcgtt
gagatgtcctttcaggccttgatgaagaggagagaagagtgggtggatggatggatggca
gttgggatatggcaattgtttgttttatatatatctgacccgcccggaaccgatctagcc
tttgactctgctagtgcttatatcaagaatgaatcaactacatatcaataccattga
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integrated database retrieval system