KEGG   Trichophyton verrucosum: TRV_06435
Entry
TRV_06435         CDS       T01615                                 
Name
(RefSeq) hypothetical protein
  KO
K12572  PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
tve  Trichophyton verrucosum
Pathway
tve03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tve00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TRV_06435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tve03019]
    TRV_06435
Messenger RNA biogenesis [BR:tve03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     TRV_06435
  mRNA degradation factors
   3'-5' decay
    Pan complex
     TRV_06435
SSDB
Motif
Pfam: Pan3_PK PH_CERLI1
Other DBs
NCBI-GeneID: 9578335
NCBI-ProteinID: XP_003019561
UniProt: D4DGY0
LinkDB
AA seq 798 aa
MASIAKPGLEDGRRTNGSPKLKGRVVENAKDTLCRNVTIYGRCRYEDKGVQLDRLRSLAR
QQTSPAQPDPNSQTLPLKATMDSSCLASSSSGAGVKQKRLNVESPSFTPSTTPNNGTAPT
SAVTAKKPATLSPKAAGAAPFLPKGSLSRANSGISQLRQETGTPEWGLTDVPDFVPQRFD
TVVCCLFQFQLIIGTGPFTKVLIAQDSMQATNNGVLATGNAYDPFVSTTTPLATAGAVVT
HPLQPNPYAHDHTGIGPTSYFTAQSTFQQPAQYHLYAPIGPHNQNILGYQRNVHDLFIPN
DFREELQKKAAATLQTLPSTFINCYILFRVCFTDCWLDSQLPTQIDHFHSLVPLDVTHQK
NATIFGYPSWVYKAQSSKDGNYYVLRRLEEESKANFFKRLPVNKRKGNQMRAGMEKGHLC
QRGDGARCLYQPQLPGQLPDLRDGLPPAVQDAGRAAPGKPHAVPEPAREHACNRACALGA
IHSAGLAARVIDASKILLTGKNRIRLNACAILDVVQHDTQRSIADLQSNDMVSFGQLILT
LGASSLAHNPTKALEHFSRAYSAQLYNSVLWLLGAGPSKEPQGQLQPANQSQNPNANANP
NANQGSDRTIDVFITGISTQLISTFDSSLHVDDELTHDLSRELENARLVRLLTKLNFITE
RPEYDHDRHWSENGERYFLKLFRDYVFHQVDSQNAPVVDLGHVLTCLNKLDAGSEEKVTL
ISRDEQSCFVVSYKELKKGVEMSFQALMKRREEWVDGWMAVGIWQLFVLYISDPPGTDLA
FDSASAYIKNESTTYQYH
NT seq 2397 nt   +upstreamnt  +downstreamnt
atggcatcaatagcgaaaccgggactcgaggacgggagacgtaccaatggctctccaaag
ctgaaagggcgcgtggtagaaaacgcaaaggatacgctctgccgcaatgtgacgatctat
ggcaggtgtcgatatgaggataaaggtgtgcaactcgaccgtcttcgttcacttgcaaga
caacagaccagcccagctcagcccgaccccaactcacaaaccctccccctgaaagccacg
atggatagctcatgtctggcctccagtagcagtggtgccggcgtcaagcagaaacggttg
aatgttgagtcgcccagtttcactccctcgaccacgccgaacaacggcacagctccgacc
tcagcagtcacggcgaagaagccggctacgctgtctccaaaggctgccggtgcagcgccc
tttcttcccaaggggtcactctcacgtgcaaactcgggaatatcacagctacgtcaggag
accgggactccggaatggggtttgacggatgtacctgactttgtgccacagcggtttgat
actgtggtatgttgcctatttcaattccagcttataatcgggacggggccgtttactaag
gtactaattgcgcaggactcgatgcaggccaccaacaacggtgtcctggccactgggaat
gcatatgacccctttgtctcgacgacgactccgctagccactgccggagcggttgtcaca
cacccgcttcaaccgaacccttacgctcacgaccacaccggcatcggtcccacctcatat
ttcaccgcccaaagtacctttcagcaaccagcacaatatcatctctatgccccgattgga
cctcataaccaaaacattcttggatatcagcggaatgtacatgacttatttatcccgaat
gactttagagaagagctgcaaaagaaggcagccgcaacactacaaacccttcctagtacg
tttataaactgttatattttattcagagtttgttttactgactgctggttagactcccaa
ctacctactcaaatcgaccactttcactctcttgtgccgcttgacgtaacgcatcagaag
aatgctactatcttcggctaccctagctgggtatataaggcacagtcaagtaaagacggc
aactactatgtgcttcgaaggctggaggaagagtccaaagctaacttcttcaaaaggctt
ccggttaacaaacgaaaaggcaatcagatgcgtgcaggcatggaaaagggtcatctctgc
cagcgtggtgacggtgcacgatgcctttaccaaccgcagcttccaggacagctccctgat
cttcgtgacggactaccacccgctgtccaagacgctggccgagcagcacctggaaagccc
cacgcggtaccagaaccggcacgcgagcacgcatgtaacagagcctgtgctctgggggcc
atccacagcgccgggctggccgcacgggtgatcgacgccagcaaaatactgctgacgggc
aaaaatcgcatccgccttaacgcctgtgccatcctggacgtggtgcagcacgacacccag
cggtccattgcggaccttcaaagcaacgacatggtcagcttcggccagctaatactcaca
cttggagcgagctcgttagcgcacaaccctaccaaggcgctagagcacttctcccgcgcc
tacagcgcacaactgtacaactcggtgttgtggctgctaggcgccggcccatccaaggaa
ccccaaggccaactccaacccgccaaccagagccagaaccccaacgcaaatgcaaacccg
aatgcgaaccagggctccgaccggaccatcgacgtgttcatcaccggcatctcgacgcag
cttatctcgacctttgactcatccctgcacgtcgacgacgagctaacgcacgatcttagc
cgggaactcgaaaacgcgcggctagtccggctgctgaccaagctcaacttcatcaccgag
cggcccgaatacgaccacgaccggcactggtccgagaacggcgagcggtacttcctgaag
ctgtttcgggactacgtgtttcaccaggtggacagccagaatgcacccgtggtcgacctg
ggccatgtgctgacgtgtctgaacaagcttgacgcgggaagcgaggagaaagtgacgctg
atcagccgggacgagcagagctgttttgtagttagctacaaggagctgaagaagggcgtt
gagatgtcctttcaggccttgatgaagaggagagaagagtgggtggatggatggatggca
gttgggatatggcaattgtttgttttatatatatctgacccgcccggaaccgatctagcc
tttgactctgctagtgcttatatcaagaatgaatcaactacatatcaataccattga

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