Trichophyton verrucosum: TRV_06752
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Entry
TRV_06752 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
tve
Trichophyton verrucosum
Pathway
tve03013
Nucleocytoplasmic transport
tve03015
mRNA surveillance pathway
tve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRV_06752
09122 Translation
03013 Nucleocytoplasmic transport
TRV_06752
03015 mRNA surveillance pathway
TRV_06752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tve03019
]
TRV_06752
03041 Spliceosome [BR:
tve03041
]
TRV_06752
03009 Ribosome biogenesis [BR:
tve03009
]
TRV_06752
03012 Translation factors [BR:
tve03012
]
TRV_06752
Enzymes [BR:
tve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRV_06752
Messenger RNA biogenesis [BR:
tve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
TRV_06752
mRNA cycle factors
Stress granule specific factors
TRV_06752
Spliceosome [BR:
tve03041
]
Complex C
Other components
EJC/TREX
TRV_06752
Ribosome biogenesis [BR:
tve03009
]
Eukaryotic type
90S particles
Helicases
TRV_06752
Translation factors [BR:
tve03012
]
Eukaryotic type
Initiation factors
eIF-4
TRV_06752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
TniB
Flavi_DEAD
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
9577200
NCBI-ProteinID:
XP_003019203
UniProt:
D4DHU5
LinkDB
All DBs
AA seq
403 aa
AA seq
DB search
MADGIDRQADENTTERMEFSTSKEVTVAPTFDDMHLKENLLRGIYAYGYESPSAVQSRAI
VQICKGRDTIAQAQSGTGKTATFSISILQVIDTVLRESQALVLSPTRELATQIQSVVMAL
GDYMNVQCHACIGGTNVGEDIRKLEHGQHVVSGTPGRVADMIRRRHLRTRNIKMLVLDEA
DELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTLE
GLKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHG
EMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSG
RFGRKGVAINFVTSEDVRILRDIELYYSTQIDEMPMNVADLLA
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggcattgacagacaggcggatgagaatactacagagcggatggagttctcg
acctcgaaggaggtcactgttgcgccgactttcgatgacatgcacttgaaggagaatctc
ttgcgtggcatatatgcgtacggatacgagtcgccttcagccgttcagtctcgcgcaatt
gttcagatctgcaaaggacgagataccatcgcccaagcacagtctggaacaggaaaaaca
gctactttctccatcagcatcctccaggtcattgatactgtgcttcgcgaatcacaggcc
cttgtcctttctcctactcgagaactcgcaactcagattcaatccgtcgtcatggccctg
ggagattatatgaatgtacaatgccatgcgtgtatcggtggcacaaatgttggtgaagat
attcgaaaactagaacacggtcaacacgttgtctccggaacaccaggccgagttgctgac
atgatccgacgccgacatctgcgtactcgtaacattaagatgcttgttcttgacgaggca
gatgaactactcaaccgcggattccgagagcaaatctacgatgtataccggtacctacct
ccagccactcaagttgtggttgtttctgccactctaccttacgatgttcttgatatgacg
accaagttcatgacagacccagtgcgcattcttgtcaaacgtgacgagttgactctcgaa
ggcctcaagcaatacttcatcgctgtggagaaagaggaatggaaatttgacacactctgt
gacctctatgatacattaactattacccaggcagttattttctgcaacacaagacgtaag
gtcgactggttgacggataagatgagagaagccaatttcactgtgtccagcatgcatggt
gaaatgcctcaaaaggagcgagacagcattatgcaagatttcagacagggcaactctcga
gtcctgatatctactgacgtttgggctcgtggtattgacgtccagcaagtctcgcttgtt
atcaactacgatctaccaagcaatcgtgaaaactatatccacagaattggccgaagtggt
cgattcggtcgcaagggtgtagctatcaactttgtgactagtgaagacgtccggatcctg
cgagatatcgaactttactactcaactcagattgatgagatgcctatgaatgttgccgat
ctccttgcttaa
DBGET
integrated database retrieval system
