KEGG   Trichophyton verrucosum: TRV_07031
Entry
TRV_07031         CDS       T01615                                 
Name
(RefSeq) hypothetical protein
  KO
K12830  splicing factor 3B subunit 3
Organism
tve  Trichophyton verrucosum
Pathway
tve03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TRV_07031
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tve03021]
    TRV_07031
   03041 Spliceosome [BR:tve03041]
    TRV_07031
   03036 Chromosome and associated proteins [BR:tve03036]
    TRV_07031
Transcription machinery [BR:tve03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     TRV_07031
Spliceosome [BR:tve03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    TRV_07031
 Complex B
    TRV_07031
 Complex C
   U2 SnRNP specific factors
    TRV_07031
Chromosome and associated proteins [BR:tve03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     TRV_07031
    TFTC complex
     TRV_07031
SSDB
Motif
Pfam: Beta-prop_RSE1_1st Beta-prop_RSE1_2nd Beta-prop_BBS7
Other DBs
NCBI-GeneID: 9582423
NCBI-ProteinID: XP_003019018
UniProt: D4DIM1
LinkDB
AA seq 802 aa
MATTSSMFMYSLTIQPPTAITQAILGQFSGTKEQQIVTAAGSKLTLHRTDPSQGKVQTLF
SQDVFGIIRSLAAFRLAGSSKDYIIIGSDSGRITIVEYVPAQNRFNRIHLETFGKSGVRR
VVPGQYLAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTVVFALTALD
VGYENPIFAALEVEYTEVDQDPTGQAYEETEKMLVYYELDLGLNHVVRRWADPVDRTASM
LFQVPGGADGPSGVLVCAEDNIVYRHSNQDAFRVPIPRRRGPTENPERKRCITAGVMHKM
RGAFFFLLQSEDGDLFKVTMEMVEDENEKATGEVKRLKLKYFDTVPLASSLCILKSGFLF
VASETGNQHFYQFEKLGDDDDEIEFISDDYSAVISEPLPPVYFRPRPAENLNLVESIASL
NPLMAASIANITEEDAPQIYTLCGTSARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKL
SRNDQFDAYIVLSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGI
RHIHADQRVNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQMS
GTVTCLSLGEVPEGRGRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMS
MIDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQRAV
LALSSRSWLGYSDVQTKSFTLTPLNYVGLEWSWNFSSEQCVEGMVGIQGQNLRYVSIIPS
TVLCLCLLFLHDELQLLSPTPA
NT seq 2409 nt   +upstreamnt  +downstreamnt
atggcgaccacctcgtccatgttcatgtactcgctcaccatccagccgcccacagccatc
acgcaggccatcctcgggcagttctcaggcaccaaggagcagcagatcgtcaccgcggcc
ggctcgaagctgaccctgcatcgcaccgacccgtcgcagggtaaagtgcagacgctcttc
tcgcaggacgtctttggcatcatccgctccctcgccgcgttcaggctcgccggcagcagc
aaagactacatcataatcggctcggactctgggagaatcaccattgtcgagtacgtgccg
gcccagaaccgcttcaatcgcatccatctcgagacctttggcaagtccggcgtcagacgc
gtcgtcccgggccagtatctcgccgttgaccccaagggcagggcctgtctgatcgcctcc
gtcgagaagaacaagctcgtctacgtgctcaaccgcaatgcgcaggccgagctcaccata
tcctcgcccctcgaggcccacaggccgcagacggtcgtctttgctctcaccgcgcttgac
gtgggctacgagaaccccatctttgccgctctcgaggtcgagtacaccgaggtcgatcag
gaccccaccggccaggcgtacgaggagaccgagaagatgcttgtctactacgaactcgat
ctcggactcaaccatgtggtcagacggtgggctgatccggtcgaccgcaccgcctccatg
ctcttccaggtgcccggcggtgctgatggtcccagtggtgtcctcgtttgcgcagaggac
aacattgtctaccgtcactcgaaccaggacgccttcagggttcctatcccccgcagacgt
gggcctaccgaaaatccagagaggaaacgatgcatcaccgccggagtcatgcacaagatg
cgcggtgcttttttcttccttctgcagtccgaagacggcgacctttttaaagttaccatg
gagatggtagaagacgagaacgaaaaggccaccggagaagtaaagagactcaaactcaag
tactttgacaccgtccccttagcttcaagtctatgtattctcaagagcggtttcttgttt
gtagccagtgaaaccggcaaccagcatttctaccagtttgaaaagctaggagatgatgac
gacgagattgaattcatcagcgatgactactcagccgttatctcagaacccttgccccca
gtctacttccggccccgaccagccgaaaacttgaacttggtagagagcattgcctctcta
aacccgctcatggctgcttctattgcaaacatcacagaggaagatgctcctcaaatatac
actctatgcggcactagtgccagaagtagctttagaacactgaaacacggcctcgaagta
tcggagatcgtcgagtccgagcttcccagtgttccgtcagccgtttggactaccaagctg
tcccggaatgaccaattcgacgcctacattgtgctatccttttcaaatggcaccctcgtc
ttgagcattggtgagaccgtggaagaagtcactgataccggcttcctctcgtctgctccc
actctcgctgtgcagcaattaggtgaagactctctcatccaagtccatccaaagggtatc
cgacacatccatgcagaccagagagtaaatgagtggccggctcctcagcatagatctatt
gttgccgctaccacaaacgagagacaagtagccattgccctgagctctggtgaaatcgtc
tactttgaaatggacaccgatggctcactggccgaatatgacgaaaagagacagatgtcc
ggcacagtgacctgtctgagcttgggagaggttcccgagggacgaggaagaagctcgttc
ctcgctgttggatgtgacgactcgaccgtccgaatcctcagtcttgatccagattccaca
ctggagaataaatccgtccaggccttgacgtccgcgccatctgccctatccatcatgtcg
atgatagattctacctctggtgggtcgacgttatacctccatatcggactctactctggt
atctacctgcgtactgtcctagatgaagtgaccggagaattgtcagatactcggacccgc
ttccttggcgtcaagccggtcaagctgttcagtgtctcagtcaaggagcagagagccgtc
ctcgcgctcagctcccggtcctggctaggatactctgatgtccagacaaagagttttacc
ctcacgcccttgaactacgtcggattagaatggagctggaacttctcctctgagcagtgc
gtggagggcatggtcggtatccagggccagaacttaaggtacgtttcaataattccatcc
actgttttatgtttatgtcttctttttttgcatgatgagctccaactcctatcgcctaca
ccggcatga

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