Trichophyton verrucosum: TRV_07315
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Entry
TRV_07315 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tve
Trichophyton verrucosum
Pathway
tve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRV_07315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tve03019
]
TRV_07315
Messenger RNA biogenesis [BR:
tve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TRV_07315
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TRV_07315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
CLZ
WKF
EAD9
PI3K_P85_iSH2
COG6_N
Motif
Other DBs
NCBI-GeneID:
9580778
NCBI-ProteinID:
XP_003018627
UniProt:
D4DJE9
LinkDB
All DBs
AA seq
628 aa
AA seq
DB search
MTSRKTQQEIDKTFKKVGEGIQSFEGIYEKIRSSSNAAQRDKLEDNLKREIKKLQRFRDQ
IKTWAAGNEVKDKSPLLEQRRAIETCMEQFKAVEKEMKTKAYSKEGLSAAARLDPKEKEK
ADTCDFLSSTVDILQQKIEAMEAEEESIQASMKKGKKDIAKSNRLADIERLSERHKWHVG
KLELLLRSLQNGNVETQQVLDAQEAIKYYAEDGHNPDFCGEDETIYDDIPLGDDEVQFGM
NNDNDRVSSQDTQSIQEDDAESRQANKGKSDSGPARRPSTQMKSPLPVLATLHLNGPSSS
SASSMKPAPPPARLPGETLKYASAAAAAAASDKAGVGIAPLPPPPGASPAVSAAQLASKA
SSTASPMVQPAQPVQVQRLMSSAGSADESGSQSKSPTLSPSVTAASRPGTMPPTPAMSKI
ETSATTPAASTSAPNKERTVTNGQAKGKSPDEPAADESVYHLPPGLQDLIHSFEVTKSRS
TAPQSASVQRLLVASHSTCPEPGDAEKPRHYKPQTPYTTPLYYPQETLPIFDDPRLYETG
RIDTDTLFYLFYYRQSTYQQYLAAKALKNQSWRFHKLYQTWFQRHEEPKNITEEYEQGTY
RFFDYESTWMNRRKGDFKFVYKYLEDDL
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgacttcccgaaaaacgcagcaagaaattgacaagaccttcaagaaggtcggtgagggc
atacaatcctttgaagggatatatgagaagatccgaagctccagcaatgccgcccaacga
gacaagcttgaagacaatcttaaacgggagatcaagaaactgcaacggtttagagaccag
atcaagacatgggctgccggaaatgaggtcaaggacaaaagcccactgctagaacaacgg
cgagccatagaaacatgtatggaacagttcaaggctgtagagaaggaaatgaagaccaag
gcctactcgaaagaggggctttcggccgcagcgcgcttggatcccaaggagaaagagaaa
gcagacacgtgtgatttcctctcctcgacggttgacattctacagcagaagatagaggct
atggaagctgaagaagagtctatacaagcgtcaatgaaaaagggcaagaaggacatcgcc
aagtcgaatcggttagcggatattgaacggttatcggaacggcataaatggcacgttggg
aagctagaattactcttacgatcattacagaacggcaatgttgaaacacaacaagtgctt
gacgctcaagaagccatcaaatactatgcggaggatggtcacaatcccgacttttgtgga
gaggacgagactatctacgacgacataccgctaggcgacgatgaagtccagttcggcatg
aacaacgacaacgaccgggtatcatcacaagacactcaatcgatacaggaagatgacgca
gagtcccggcaggccaacaagggcaagtcagattcaggtcctgcacgacggccatcaaca
cagatgaaatcccctctacccgtccttgccacgctccatcttaatggcccttcgtcatcg
tcagcaagttcaatgaaacctgcaccccctccggcacgattacccggagagactctcaaa
tatgcctctgctgccgccgccgctgctgccagtgacaaggctggtgttgggattgcaccc
ctcccaccaccccctggtgccagccccgccgtatcggcagcacagcttgcttccaaagcg
tcgtcaacggcgtcacctatggtccagcccgcacagccggtgcaggtacaacggctcatg
tcctctgccggcagcgcagacgagtcaggaagtcaatccaagtcgcctacattaagtccg
agcgtgactgcagccagtcgaccggggaccatgcctcctacacccgcgatgtccaaaata
gaaacatcagcaacaaccccggctgcatcaacgtcggcccctaataaggaacgtacagta
acgaatggccaggcaaaggggaagagcccagatgagccggccgcagacgaatcggtatat
catctccctccaggtctccaagatctgattcactccttcgaggtgaccaagtcacggtcg
acagctcctcagtcggcgtctgtacaacggttattggtagcctcacatagtacatgccca
gagccgggagatgcggagaagccccgtcattacaagccccagacgccatacacaacgcca
ctttattaccctcaggagacattacccatatttgacgatccacgactatacgagaccggc
agaatagatacagacacgctgttctatctcttctactaccgtcagtccacgtatcagcag
tacctggctgccaaggccctcaagaaccaaagctggcgcttccacaagctgtaccagacc
tggttccagcgccatgaggagccgaagaacatcactgaggaatatgagcagggtacttat
cggttctttgattatgaaagcacctggatgaaccgacgaaaaggtgattttaaatttgtc
tacaagtaccttgaagatgatttgtaa
DBGET
integrated database retrieval system
