Trichophyton verrucosum: TRV_07620
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Entry
TRV_07620 CDS
T01615
Name
(RefSeq) RecQ family helicase MusN
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
tve
Trichophyton verrucosum
Pathway
tve03440
Homologous recombination
tve03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TRV_07620
03460 Fanconi anemia pathway
TRV_07620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tve03032
]
TRV_07620
03400 DNA repair and recombination proteins [BR:
tve03400
]
TRV_07620
Enzymes [BR:
tve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TRV_07620
DNA replication proteins [BR:
tve03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
TRV_07620
DNA repair and recombination proteins [BR:
tve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
TRV_07620
Bloom's syndrome complex (BTR)
TRV_07620
FA (Fanconi anemia) pathway
TRV_07620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RQC
ResIII
Motif
Other DBs
NCBI-GeneID:
9584297
NCBI-ProteinID:
XP_003018365
UniProt:
D4DK99
LinkDB
All DBs
AA seq
1341 aa
AA seq
DB search
MTKNNLKAHLAWLLERPNPLDNFVIPQVTLDSQVALADSASTEPTTYIEPELGQRPSTAL
HIEEVSSAPRAAAPGNDDVSTDNTMAVLQLASPPPRNRLHSTLSAKCSIDVPGTPAERNS
KKRPLYRTESETPKIRIKQRSLTSITPPTSSNSSRLARKVGISGSVLKQEEIESVDLTKD
AERNLSSSGSASTFGEPRRLWREDYASRSGPHSSSSEKKKRRKTPDSEDDSYPQKKHSSP
SPIVRQLKREKIRPEKAKTPVAQRVINDSEDDGVYLDMMKEDTFYPRLSQGKESTEASKK
INERNVISEPKLDVSQSSSIAQPPKGTQAHPLHPSTPANPLPSERADALITRYLNTPPTS
FRRIINTLNNDRTIKAKSAYDLILEGIDSQDKMKEVRILASRIKAMEELQELHSDFCSSK
MNHDRLKSALIASIEQMGDIPDSFKVTEIRESAQRLQEKEAKIVSLIQESEMFKGQSCDI
STTDIDSFEKADQEPDSFSQVKSTVLPQASTSEDESRHHTSAIPKPNDTTSLPSNHTGGT
RRNDIMRPPVPETRWSQEFPSAPRNVKSPLSSWDTQFDDAEDFVDMLDDDPPYSRTMDAP
CGLATTATAVDSDFDDRSASNPYDELEDFFDSPNSKPAPSAPGPPESHSQFPNREVFRET
SGNQSKPPSVKHLSQKDVGQISSVEGHPWSRDVKSAMRETFKLRGFRPNQLEAINSTLSG
KDTFVLMPTGGGKSLCYQLPSIIRTGKTKGVTIVISPLLSLMQDQVAHLQKLNVKAFLIN
GDVSKDERATIMNNLRSLRADSLIQLLYVTPEMLAKSRAMESVLLQLHSNDKLARIVIDE
AHCVSQWGHDFRPDYTALGTMREKYSGVPVMALTATATPNVQVDVIHNLRMKGCEVFTQS
FNRPNLTYEVRKKGRAQDALKDIADLITNDYPDKCGIIYCLSRKTCERVAMQLSSKFGVK
AAHYHAGLSSKDRFTVQRDWQSGKHNVIVATIAFGMGIDKADVRFVIHHSIPQSLEGYYQ
ETGRAGRDGKRSECYLYYAYYDSTSIGYMIKKNKETTHEQKQRQRQMLRHVTQFCENITD
CRRAQILAYFDEKFKREDCNRTCDNCKSDFTFEIRDFTQHAAAAVRLVGNLESAKVTVLA
CVDAFRGYPRQSEFSQLPEFGYGSELERGDVERLFRHLLYEDAIEEHNVPNQRGFAVQHV
KLGRNAQRFKTGRHKTELPIRITPGKATTTRRVDTNFTGVRVARDDQPESTNVSSPIRGP
SHLRMQDRRSRKVQTEDDEDDDDSDGFAPIRDARNPGSPSRSRHSQLGPRITDDGSRSGL
SDLREMVLDDFLLRAKGKCEQ
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaacaatttaaaggctcacctggcctggcttttggagcgtcctaacccactc
gacaattttgtgattccccaagtgacgctcgattcgcaggttgcgttagccgattccgcg
agcactgagccgacgacttatatcgagccagagcttggccaaagaccatctactgcatta
cacatagaagaagtttcatccgctccgcgggctgctgctcctggtaatgatgatgtgtcg
actgataatacaatggccgtactccagctcgcatctcccccaccacgcaataggctacac
agtacactaagcgccaaatgctcaatcgatgtaccaggaactccggcagaaaggaattcc
aagaaacgacccctgtatagaaccgagtcagagacgccaaagataagaataaaacaacga
agcctaacaagcataactcccccaaccagtagcaacagctcaaggcttgcgagaaaagtt
ggaatatctggttcagtcctaaagcaagaggaaattgagtctgttgatctcacgaaagat
gctgaacgcaatctatcttcttcaggctccgcgtcaaccttcggagaacctcggcgatta
tggagagaggactatgcatctcgttcggggccacatagtagtagcagcgagaagaagaaa
aggcggaaaacccccgattcggaggatgactcctatcctcaaaagaagcactcttcccca
tcccccatagttcggcaattgaaaagggagaaaatacggcctgaaaaggccaagacccca
gttgcgcaacgagtcatcaatgactctgaagatgatggtgtttatctcgacatgatgaaa
gaagataccttctaccctcgcctgtctcaaggaaaggaaagcacggaggcttccaagaag
ataaatgagcgtaatgtcatatcagaaccaaagcttgatgtttcacaatcatcatcaatt
gcacagcctcctaaaggaacccaagcacaccctcttcatccctctactcctgcaaacccc
ctccctagtgagagggcagatgcactgataacgagatacctgaacacacctccaacatct
tttcgtcgaataattaataccctcaataacgacaggacaataaaggcaaaatctgcctat
gacctgatcttggaagggattgacagtcaggataagatgaaggaagtcaggattctggcc
tcccgtataaaggccatggaggaacttcaagaattacattctgatttctgttcctccaaa
atgaatcatgacaggttgaagtcagccctaatagcctccattgaacagatgggcgatatt
cctgacagcttcaaggttactgagatcagggagtcagcccaacggctacaggagaaggaa
gcgaaaatagtttccttgatacaggagtcagaaatgtttaaagggcagagttgtgatatt
tcgacgacggatatagattcgtttgaaaaagcggatcaagaaccagattccttttcccag
gtcaaatcaactgtactaccacaggcttccaccagtgaggatgagagccgccatcatact
tctgccataccaaagcccaatgatacaacatcactccctagcaaccacactggtggaacg
agaagaaatgatatcatgcgtcctccagtacccgagacacggtggtcacaagagttccct
tctgctccacgtaatgtcaagagccccctaagtagttgggatacccaatttgacgatgcc
gaggattttgtcgatatgcttgacgatgaccctccttattctagaaccatggacgctcca
tgtggcctggcaacaacggcaactgcagttgactccgacttcgatgatcgatctgcctcc
aatccatatgatgaacttgaggacttttttgattctcctaattccaagcccgctccgtct
gctcctggcccccctgaatcccactctcaattccctaatagggaggtgttccgtgaaacg
tccggaaatcagtcaaaaccgccgtcggtgaaacacctcagtcaaaaggatgttggccag
ataagctcagtggaaggccatccttggagcagggacgtcaaatctgccatgagagaaaca
ttcaaactacgcggcttccgccccaatcaactcgaagctatcaattctaccctcagtggc
aaagatacctttgttttaatgcccacaggaggtggtaaatctctttgttatcaactgcca
tctataatacgaactgggaaaacgaaaggagttactatagtgatttctcctttactaagt
ctaatgcaagatcaagttgcccatcttcaaaaactcaatgtgaaagccttcttgataaac
ggagatgtgtcaaaggatgaacgagctacgattatgaacaatctccggagcctccgagcc
gactcacttattcaattgctctacgttacacccgaaatgcttgccaaaagccgtgccatg
gaaagcgtattgcttcaactccatagtaacgataagcttgctcgcatagttattgatgaa
gctcactgtgtcagtcagtggggccatgacttccgaccagattatactgcgctgggtacg
atgagagaaaagtattctggtgtcccagtaatggcattgactgccacggcaaccccaaat
gtccaagttgacgttatacacaacttgcggatgaaggggtgtgaagtttttactcaatcg
tttaaccgcccaaatctgacgtacgaagtgcgaaagaagggaagagcccaagatgcactc
aaagatatcgccgatcttattacaaatgattaccctgacaaatgtggaataatatactgc
ctctcgagaaaaacttgcgaaagggtagctatgcagctctcctccaaatttggcgtcaag
gcggctcattaccatgccgggctgagctcaaaggaccggtttacagttcaaagagattgg
cagtcaggaaaacataatgttatcgttgcgacaatcgcttttgggatgggaatagataag
gctgatgtgcgctttgttattcaccactcaattccacagagcctggaagggtattaccag
gaaactggccgggctggtagagatggcaaacgatctgaatgctatctctactacgcctac
tatgattctacttcgataggttacatgatcaagaaaaacaaggagactacccatgaacaa
aaacaacgccagcgacagatgctacgtcacgtcacccagttttgtgaaaacatcacggat
tgcagacgtgctcaaattctcgcatattttgacgagaaatttaaacgagaagactgtaac
aggacatgtgataactgcaaatctgacttcacatttgaaattcgtgactttacgcagcat
gctgctgctgctgttaggcttgttggaaatctggaaagcgcgaaagtgacagtcctggcg
tgtgtagatgccttcagaggttatccacgccagtcagagttctctcaacttccagaattt
ggatacgggagtgaacttgaacgtggcgatgttgaacgattgtttagacatctcctttat
gaagatgcgattgaagaacacaacgtacccaatcaacgaggattcgctgttcagcacgtc
aagctgggacgaaatgctcaacggttcaagactggtcggcacaagacggagctgccgata
cgtatcactcctggcaaagcaactactacccgacgggttgacacgaactttactggtgtt
cgagtcgcgagagatgatcagccagaatccaccaatgtgtcttcgccaattcgaggccca
tctcatttgcgcatgcaagatcggagaagtcgcaaggtgcaaacagaagatgatgaagat
gacgacgatagtgatggttttgcccccattcgtgatgcaagaaacccaggcagtccatca
agatcgcgtcactcacagcttggccctagaataacagatgatggaagccgttctggcctg
agcgatcttcgtgaaatggttctagacgattttttgctgagggcaaaagggaaatgtgaa
cag
DBGET
integrated database retrieval system
