Thiocystis violascens: Thivi_0024
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Entry
Thivi_0024 CDS
T02138
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
tvi
Thiocystis violascens
Pathway
tvi03030
DNA replication
tvi03430
Mismatch repair
tvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Thivi_0024
03430 Mismatch repair
Thivi_0024
03440 Homologous recombination
Thivi_0024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvi03032
]
Thivi_0024
03400 DNA repair and recombination proteins [BR:
tvi03400
]
Thivi_0024
Enzymes [BR:
tvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Thivi_0024
DNA replication proteins [BR:
tvi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Thivi_0024
DNA repair and recombination proteins [BR:
tvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Thivi_0024
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
AAA_16
AAA
AAA_5
NTPase_1
nSTAND3
RPC5_C
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AFL72116
UniProt:
I3Y548
LinkDB
All DBs
Position
21416..22429
Genome browser
AA seq
337 aa
AA seq
DB search
MTVPDAPLPWLADIWSRLQASRAADRLAHGLLISGPRGVGKRQLVERLARSLLCRERDAQ
GVACGRCADCHLVTAGSHPDLIRVGPDPEAKSGEITIGTIRDFAGRESLTPSRADWKVAL
IDPADRLNPAAANALLKTLEEPAGRTILCLIGERIGQLPATIRSRCQQIKVPIPAESDAL
AWLSAQTSRSDQALRLRLAHGAPLRALAEFDDDLLEQRRQRLAGFLAIAAGTRDPVSEAA
VWNTLGARQILDWLAGWLCDLLRLMVANEPVRLDNPDRHADFARLAGHLDPASGHRFLRQ
VLEGRAQAETNVNPLLLLESLAIEWSMLNHLRDHGRP
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgcctgacgcccccttgccctggctggccgatatctggtcacggctccaagcg
tcgcgcgcggcggatcggctggcgcacggtctgctcatcagcggtccgcgcggggttggc
aaacgccagcttgtcgaacgccttgcccgttcgctcctgtgtcgcgaacgcgacgctcag
ggtgtggcctgtggacgctgtgccgattgtcatctggtgaccgccggaagccatccggat
ctgatccgggtcggaccggaccccgaagccaagtccggcgagatcacgatcgggacgatc
cgcgacttcgcggggcgcgaatcgctcacgccgagccgcgccgactggaaggtggcgctg
atcgatcctgccgatcggctcaaccccgcggcggccaatgccttgctcaagaccctcgaa
gagcccgccggacggaccatcctctgtctgatcggcgagcgaatcggccagcttcccgcg
accatccgcagtcgctgtcagcagatcaaggtgccgatcccggctgagtcggacgcgctg
gcctggttgagcgcacagacctcgcgaagcgatcaggcactccggctgcggctggcccat
ggcgctccactgcgcgcgctcgccgaattcgatgacgacctgctcgaacagcggcgccag
cgattggccggatttctcgcgatcgcggcgggaacccgcgatccggtcagcgaggcggcg
gtctggaatacgctcggcgcgcggcagatcctggactggctcgcgggatggctgtgcgat
ctgctgcgcttgatggtcgccaacgaaccggtcagactggacaacccggaccggcacgcg
gacttcgcgcgtctcgcggggcacctcgatccggcgtccgggcatcgtttcctgaggcag
gttctggaagggcgcgcccaggccgaaaccaatgtcaatccactcttgctgttggaatcg
ctggccatcgaatggtcgatgctcaatcaccttcgcgatcatgggagaccctga
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