Thiocystis violascens: Thivi_0245
Help
Entry
Thivi_0245 CDS
T02138
Name
(GenBank) DNA polymerase III epsilon subunit-like 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tvi
Thiocystis violascens
Pathway
tvi03030
DNA replication
tvi03430
Mismatch repair
tvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Thivi_0245
03430 Mismatch repair
Thivi_0245
03440 Homologous recombination
Thivi_0245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvi03032
]
Thivi_0245
03400 DNA repair and recombination proteins [BR:
tvi03400
]
Thivi_0245
Enzymes [BR:
tvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Thivi_0245
DNA replication proteins [BR:
tvi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Thivi_0245
DNA repair and recombination proteins [BR:
tvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Thivi_0245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AFL72314
UniProt:
I3Y5P6
LinkDB
All DBs
Position
complement(256560..257237)
Genome browser
AA seq
225 aa
AA seq
DB search
MLSLLDWQRRWRLRRAPPGPLRDYLQQPFAHPRTDYRELEYLAIDLETTGLDSRRDLILS
VGYVVVRGVRIDLSTARHQVVRIDRSIPEASAVIHQITDDQSADGCELVDAIAELLPALA
GRIMIAHHASIEQSFISNACKHAWGQGLPMRIVDTQALALRTFERRQIPFKVSDLRLHAL
GNRYNLPRYGAHNALSDALAAAELFLAQAAYRDDGRGLPLADFLC
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgctttcattgctcgactggcagcgccgctggcgcctgcgccgcgcgccgccaggcccc
ttgcgcgactatctgcaacagcccttcgcgcatccgcgaacggattatcgcgaactggaa
tatctggccatcgatctggagacgaccggactcgacagtcgccgcgacctgatcctgagc
gtcggctatgtcgtcgtgcgcggggtccggatcgacctgtccaccgcccggcaccaggtg
gtgcgcatcgaccgttccattccggaggcgagcgcggtcatccatcagatcaccgacgac
cagtcggccgatggctgcgaactcgtcgacgcgatcgcggaactgctgccggcgctggcg
ggcaggatcatgatcgcccatcatgccagcatcgagcagagctttatctccaatgcctgc
aaacacgcttgggggcaagggctgccgatgcggatcgtcgacacccaggcgctggccctg
cgcaccttcgagcggcggcagatccccttcaaggtctccgatctccgtctgcatgcgctc
ggcaatcgctacaatcttccccgctacggcgcccacaacgccttgagcgacgcgctggcc
gccgccgagctgtttctggcccaggcagcctatcgggacgatggtcggggcctgccgctc
gccgatttcctgtgttga
DBGET
integrated database retrieval system
