KEGG   Thiocystis violascens: Thivi_0456
Entry
Thivi_0456        CDS       T02138                                 
Name
(GenBank) CRISPR-associated helicase, Cas3 family
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
tvi  Thiocystis violascens
Brite
KEGG Orthology (KO) [BR:tvi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tvi02048]
    Thivi_0456
Enzymes [BR:tvi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Thivi_0456
Prokaryotic defense system [BR:tvi02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Thivi_0456
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 DEAD ResIII
Other DBs
NCBI-ProteinID: AFL72518
UniProt: I3Y6A0
LinkDB
Position
469347..472100
AA seq 917 aa
MEFTAQYFRYWGKADSAGEGGVQWHPLAYHCLDVAACGQVLLRHQSAWLEKIAVLSGLDP
AALSQWLIFLLSMHDIGKFGDGFQALRPDLPGELQGQAARVAYDVRHDTLGYALGMESLP
GWLGHDASDDLESDLLRPWLAAVAGHHGRPPKNLPTQAILKRQFRPAVLADVRQFVDDAR
KLLFPIGWCLPEPAPGGAERQQQASWLVAGFAVVSDWLGSNTRWFNYQHPERSLEDYWQT
VALPTAEQAVYESGLLGPSPAKQATFAGLFPHLASALTPLQTWANSVTIAPGPQLFILEE
LTGGGKTEAGLTLAARLMSEGRGFGLYFALPTMATADAMFDRLRKRHAGHDQETWQGFFS
TGESSLVLAHSAAATKTKLDALRRRDAGYDPQHEEPSASQHSTAWLADSRKKALLADFGV
GTVDQALLGVLPLRHQSLRLLGLSTKILVVDEVHACDCYMGELLARLLRFHAGLGGSAIL
LSATLPIDQRARLLAAFADGAGYPTTKPEESAYPLATHLHSTDLDETPLQAREAVSRPVA
IDSLADEAAVFQRLESTIQRGGCAVWGRNTVADAMGAWQTWNANHPDSPAILFHARFALG
DRLDIAETIKHRFGPDSTAETRGGRLVIATQVVEQSLDVDFDDMVTDLAPIDLVVQRAGR
LQRHTREATGNLAPTEGRGGARLGVLMPEPTPDAAADWFKGFLSKAARVYPDHGKLWLTA
RWLVEHGGFDLAAQARDLIESVYGDTGYDRTPAPLQKITDDAEGACHADRGTARGNLLSF
EQGYDPTGLHWPDEDEHADITTRLGEKTVRLRLAKIVEDELIAWAAADPGIAWSLSELTV
ARRLVAGESPREATRIERARQSMPDEGRYCLIVPLEQSGAEWRGWAVNQQDEEIRVIYSP
TAGLRIETGDVIDESDL
NT seq 2754 nt   +upstreamnt  +downstreamnt
atggagttcacggcacagtattttcgctattgggggaaggcggattcggcgggtgaggga
ggcgtgcaatggcacccactggcttatcactgcctggatgtggcggcttgcggtcaggtg
cttctgcggcatcagtcggcttggctggaaaaaatagccgtcttgtccggactcgacccc
gccgcgctgtcgcaatggctgatttttctcctctcgatgcacgacatcggcaaattcggg
gatggctttcaggcgttgcggcctgatctgccaggcgagcttcaagggcaagcggcacga
gtcgcttacgacgtgcgccatgacacgctgggctatgccttgggcatggaatcgctgccc
ggctggcttgggcacgatgcgagcgatgatctggaaagcgatctgctgcgaccctggctg
gcggctgtcgcggggcatcatggccgtccgccgaaaaacctgccgacacaagcgattctc
aagcgtcagttccgcccggctgtgctcgccgatgttcggcaattcgtcgacgatgcaagg
aaattgttgttccccatcggttggtgcctgcccgaaccggcgcccggcggggctgagcga
caacagcaagcctcgtggttggttgccggtttcgccgtcgtcagcgactggctcgggtcg
aatacccgctggttcaactatcagcatccggaacggagcctggaagactattggcaaacc
gtcgcgctcccgactgccgaacaggcggtctacgaaagcggtttgctcggaccgtctcca
gccaaacaggccacattcgccggcttgtttccccatctcgcgtccgcgctcacaccactc
cagacctgggcgaattccgtcaccatcgcgccggggccacaactcttcatcctggaagag
ctgacaggcggcggtaagaccgaagccggactcacgctggccgcgcgtctcatgtccgaa
ggccggggtttcggcctctatttcgccctgccgacaatggccaccgcggacgccatgttc
gaccgactgcggaaacggcatgccggtcatgaccaagagacctggcaagggtttttctcg
accggcgaatcctccctggtgctcgcgcattcggccgccgcgaccaagaccaaattggat
gccctgcggcggcgcgatgcaggttacgacccccagcacgaggaaccttcggcctctcag
cacagcaccgcctggcttgcagacagccgcaagaaggcgctgctcgcggatttcggcgtc
gggacggtggatcaagcccttctcggggtgctgccgctgcggcaccaatcgctacgcctg
ctggggctctccaccaagattctggtggtggacgaggttcacgcctgcgactgctacatg
ggcgaactgctcgcccgcctgctgcgctttcatgccgggctcggcgggtcggcgatcctc
ctttccgccaccctgcccatcgaccagcgggcaagactcttggccgcctttgccgatggc
gcgggttatccgacaaccaaacccgaagaatccgcctatccgctggctactcatctgcat
tccaccgatctcgacgaaacgccactccaggcgcgggaggcggtttcgcgcccagttgct
atcgactcgcttgcggatgaggccgccgtcttccaacgactggaatcgaccatccagcgc
ggcggttgcgcggtctgggggcgtaacaccgtggcggatgccatgggtgcctggcagacc
tggaacgccaaccatcccgacagcccggcgatcctgttccatgcccgctttgcactgggc
gatcggctcgatatcgccgagaccatcaagcaccgtttcggaccagacagcacagccgag
acccgagggggccgattggtcattgccacgcaggtggtcgagcaatcgctggatgtcgat
tttgacgacatggtgaccgatctggcgcccatcgatctcgtcgtccagcgggcaggacgc
ctgcaacgtcatacgcgcgaggccacggggaatcttgcaccgacggaggggcgtggcggc
gcccggctaggcgtactgatgcccgagccgacgcctgacgccgccgccgactggttcaag
gggtttctctccaaggcggccagggtctaccccgatcacgggaaactctggctgacggcg
cgctggttggttgagcacggcggcttcgatctcgccgcgcaggcacgcgatcttatcgag
agcgtctatggcgatacgggttatgaccggaccccggcaccgcttcaaaaaatcacggac
gatgccgagggcgcctgtcatgcggatcgcggcacggcgcggggcaacctgctgagtttc
gagcagggctatgaccccaccgggttgcactggcccgacgaggacgagcacgccgacatc
accacccgcttgggcgagaagaccgtgcgcctgcgtctcgcgaaaatcgtcgaggatgaa
ttgatcgcctgggcggcagcggaccccggcatcgcttggtcgctgtcggaactcacggtc
gcgcgccgtctggtggcgggcgaaagccctcgcgaagcgacccggatcgagcgcgcgcgc
caatccatgccggacgaaggccggtactgtctgatcgtgccgctggaacagtctggggcc
gaatggcgcggctgggcggtgaatcagcaagacgaagagatccgcgtgatctattcaccc
acggcaggtttacgcatcgaaacaggagacgtcatcgatgaatctgatctctga

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