Thiocystis violascens: Thivi_0695
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Entry
Thivi_0695 CDS
T02138
Name
(GenBank) PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
Organism
tvi
Thiocystis violascens
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
CHASE
GGDEF
PAS_3
PAS_9
PAS
PAS_4
CZB
PAS_8
Motif
Other DBs
NCBI-ProteinID:
AFL72749
UniProt:
I3Y6Y1
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Position
750071..753583
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AA seq
1170 aa
AA seq
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MMKIQEESWHAWVALGCGLLATLFISVQVKQGIEADAVRQFGFDCDQVTLKIRERLGAYA
LILRGGAALFAASGMVDRQEWRSYVETLRAQDSLPGVQGIGFAQVFPSDQLDGHLSRIRA
EGFPEYQVHPPGERAIYTAIIYLEPFRDRNLRAFGYDMFSEPVRRAAMEQARDTGEAALS
GKVVLVQESGAEVQAGALMYVPVYRNGWPLESVEQRRAALFGWSYSPYRMNDLMIGILGD
WTHYDGEPIDLRIHDGSLATPETLLFDSRGGRQAHASSALRQQVRHLGFNGHRWLLVFDQ
TSQTSGIRAAWAWATLLGGLALSGLLFGLMLSVVNTRANIRIARNLADKLRRREQLLKES
EFRWRFALEGAGDGVMDWSVPDGKVFYSRRWKEMLGFAKDEICDRLEEWEGRIHPEDQAH
ALATIQAYFDGKIPCYVSEHRLRCKDGDWKWMLVRGMVVSFDDAGKPLRMIGTYTDITAW
KRSEEQLRLAASVFTHASEGIMITTAEGTIIDVNDAFTRITSYDRDEVLGRNPRLLTSGR
QGREFYESMWRTLIEDGHWSGEIWNRRKNGEVYAEMQTISAVRDAQGSPQHYVALFSDIT
ALKEHQRQLEHIAHYDALTSLPNRVLLSCRLLQAMTQTKRRAQRLAVAYLDLDGFKAIND
SHGHEAGDQLLMIVAGRMKQSLREGDTLARLGGDEFVAVLVDLGDETGSVPMLTRLLMAA
AQPVPVEGLVLRVSASIGVTFYPQSEEVDADQLLRQADQAMYQAKLSGKNRYCFFDAEQD
QSIRGHHANLEQIRRALTVSEFILHYQPKVNMRTGAVIGVEALIRWQHPERGLLAPALFL
PVIEDHPLAIDLGEWVIETALTQMDVWRAGGLNLPVSVNIGARQLRQTNFVECLRARLLA
HPDIVPNGLGLEVLETSAQEDLNRVSTVIDACREIGVLCALDDFGTGYSSLTYLKRLAVS
LLKIDQSFVRDMLDDPEDLAIVESVLGLAAAFRHQALAEGVESLEQGEILLQLGCELAQG
YGIARPMPGEAVPDWVRSWHPDRIWSQQQPLDRDELPILFAIVEHRAWMLAIEHALKGKG
VCALGPDLHDCHLGQWLAGEGAARHGARPAFQAIMRTHRRLHESARQLLKDHAQGRENET
PAELEELRGFHAALLLQMRQLLNGSSRRVG
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaatccaagaagaatcatggcatgcctgggtggcgctcggttgcggactcttg
gcgacgctctttatcagcgttcaagtcaagcaggggatcgaggcggacgccgtccgtcag
ttcggcttcgactgcgaccaggtgaccctgaagatccgcgagcgtctgggcgcctatgcg
ctgattctgcgcggcggcgcggcgctgttcgcggcatcggggatggtcgaccgtcaagaa
tggcggtcctatgtcgaaaccctgcgggcacaggacagcctgcccggcgtgcaggggatc
ggttttgcgcaagtgttcccgtcggatcaactcgacggccatctttcccgtatccgcgcg
gaaggctttcccgagtaccaggtgcatccgccgggcgagcgtgccatctacaccgccatc
atttatcttgagcccttccgcgaccgcaatctgcgtgccttcggatacgacatgttttcc
gaaccggtgcgacgggccgccatggaacaggcgcgcgataccggcgaagcggccttgtcc
ggcaaggtcgtgctggtgcaggagagcggcgccgaggtgcaggcgggagccctcatgtat
gtccccgtttatcgcaacggctggcctctggagagcgtcgagcaacgacgggcggcctta
ttcggctggtcgtacagcccctaccggatgaacgatctgatgatcgggattttgggcgat
tggacgcattacgatggcgagccgatcgatttgcgtatccacgatggttccctggcgacc
cccgagacgctgctgttcgacagccggggagggcggcaggcgcacgcctcttccgcgcta
cgccaacaggtacggcatctcggtttcaacggccatcgctggctgctggtcttcgatcag
acctcgcagacgtccgggattcgcgctgcctgggcctgggcaaccctgcttggcggactg
gcgctcagcggcctgctgttcggcttgatgctgtcggtcgtcaacacccgcgccaatatc
cgtatcgcccgcaacctggccgacaagctccggcggcgcgagcagttgttgaaggaaagc
gaattccgttggaggtttgccctcgaaggcgccggcgacggcgtgatggactggagcgtg
ccagacggcaaggtcttttattcccggcgctggaaagagatgctcggttttgccaaggac
gagatctgcgaccgcctggaggaatgggaaggccgcatccaccccgaggaccaggcgcac
gccctcgcaacgattcaagcctatttcgacggcaagatcccatgttatgtcagcgaacac
cgtctccgctgcaaggatggcgattggaaatggatgctggtgcgcggcatggtggtcagt
ttcgatgacgcgggcaaacccctacgcatgatcggtacctataccgacattaccgcctgg
aaacgctcggaagaacagcttcgattggccgccagcgtcttcacccacgccagcgaaggc
atcatgatcaccaccgccgaaggcacgatcatcgatgtcaatgacgcctttacccgcatc
accagttacgaccgcgacgaagtgctgggccgcaatccgcgcctgctcacctcggggcgt
cagggacgcgagttctacgagtcgatgtggcggaccctgatcgaggatggccattggagc
ggcgaaatctggaatcgtcgcaagaatggcgaagtgtacgccgagatgcaaaccatcagc
gccgtgcgcgacgcgcagggcagcccccagcactacgtcgccctgttctccgacattacc
gcgctcaaggagcatcaacgccagctcgaacatattgcccattacgatgcgctgacctcg
ctgcccaaccgcgtgctgctctcctgccgtctgcttcaggccatgacgcagaccaagcgg
cgcgcgcaacgcctggcggtggcctatctcgatctggacggtttcaaggccatcaacgac
agccacgggcacgaagccggcgatcaattgctgatgatcgtggcggggcgcatgaagcag
agtctgcgcgagggcgacaccctggcccgtcttggcggcgacgaattcgtcgccgtgctg
gtcgatctgggagatgagacgggcagcgtgccgatgctcacccgtctgctcatggcggcg
gcccagcccgtgcctgtggagggtctcgtcctgcgggtctcggccagcatcggcgtcacc
ttctatccgcagtcggaggaggtcgacgcggatcaactgctgcgccaggccgaccaggcc
atgtatcaggccaagctatccggcaaaaatcgctattgcttctttgacgccgagcaggac
cagagtattcggggtcatcacgccaacctggagcaaatccgtcgtgccctgacggtcagc
gaattcattctccattatcagccgaaagtcaacatgcggaccggcgcggtcatcggtgtg
gaggcgctgatccgttggcaacatccggaacgcggcctattggccccggcgctgtttctg
ccggtgatcgaagatcacccgctggcgatcgatctcggcgaatgggtgatcgagacggcg
ttaacccaaatggacgtctggcgcgcgggcggtctgaatctccccgtcagtgtcaatatc
ggcgcccgccagttgcggcagacaaactttgtcgagtgtttgcgggcacgcctgctcgcc
catccggacatcgttccgaatggccttggactggaagtgctggagaccagcgcacaggag
gatctgaaccgtgtctcgacagtgatcgatgcctgtcgggagatcggcgtcctctgtgcc
ctggacgattttggcaccggatattcctcgctgacctacctcaaacgcctggcggtcagc
ctgctcaaaatcgaccagagcttcgtgcgcgacatgctcgacgatccggaggatctggcg
atcgtcgagagcgtcctgggactggccgccgcctttcgccatcaggcgcttgccgaaggg
gtggagagtctggagcaaggcgagatcctgctgcaactcggttgcgaactggcccagggg
tatggcattgccagacccatgccgggcgaagccgtgccggactgggttcgctcctggcat
cccgatcggatctggagccagcagcagcctctcgaccgcgatgagttgccgattctcttt
gccatcgtcgagcaccgcgcctggatgctggccatcgaacacgctctaaagggaaagggc
gtgtgcgcgttgggcccggaccttcatgactgccatctggggcagtggctcgcaggggaa
ggcgcggcgcgtcatggcgcgcggccggcctttcaagcgatcatgcgcacgcatcggcgg
ttgcacgagtcggcccggcagttactgaaagatcatgcccaaggccgtgagaacgagacg
ccggccgaattggaggaactgcgcggtttccatgccgcgctcttgttgcagatgcgccag
ttactgaacggaagcagtcggcgggttgggtaa
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