Thiocystis violascens: Thivi_0901
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Entry
Thivi_0901 CDS
T02138
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
tvi
Thiocystis violascens
Pathway
tvi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tvi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Thivi_0901
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvi02000
]
Thivi_0901
Transporters [BR:
tvi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Thivi_0901
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AFL72939
UniProt:
I3Y7H1
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All DBs
Position
980680..982839
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AA seq
719 aa
AA seq
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MSNKIRILTILLPIFLIAGCGDSPWNDPYPAADADSNTVYSSFDERPKHLDPARSYSANE
YAFLAQIYEPPLQYHFLLRPYRLVPLSAAEVPVARYFDAAGNPLPEDAPAADIARSDYLI
RIQPGMRFQPHPAFARDAEGRFRYHALTAADLDGINRLADFPEVGTRELTAEDFVHQIKR
LAAPWLHSPIAGVMGQHIVGFQELAGQLESAAGQGPLEQAETLRQSSLAGVEAVDRDHFR
ISLKGKYPQFAYWLAMPFFAPMPWEAEVFYAQPGLAERNITLDWYPVGSGPFFLSENNPN
LRMVLERNPNFHGESFPTEGMPGDAESGILTDAGKPLPFIDRAVYSLEKESIPRWNKFLQ
GYYDSSGIASDAFDQAVQIDVEGEPILTDAMREQGISLLTSVEPSSFYLGFNMLDPVIGG
DSPRARLLRRAISIALDYEEFISIFTNGRGVVAQGPIPPGIFGHREGEAGINPFVYEWRD
GRPVRRSLDEAKVLMEQAGYPNGIERETGRTLTINYEAVATGPDDRARLNWIRKQFAKLG
IDLVIRSTDYNRFQDKLRNGTGQVFMFGWNADYPDPENFLFLLYGPNGKVEHQGENATNY
ANPEFDRLFDEMKFMDDGPERQAILDRLVEIARTDAPWIWGFHPKAFSLHHQWMANASPN
QMANNTLKYRRIDPELRKQKRQDWNQPVLWPLWVGAGLLVALVLPAWWLVRRRERRTAL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaacaagatccggattttgacgatcctgctgccgatctttctgatcgccggttgc
ggggactcgccctggaacgatccctatccggcggcggacgccgacagcaacacggtgtac
agctcgttcgacgaacggcccaagcatctggatccggcgcgctcctacagcgccaacgag
tacgcctttctggcgcagatctacgagccgccgcttcagtatcatttcctgctgcgcccc
tatcgtctggttccgctgtcggccgccgaggttccggtcgcgcgttatttcgacgcggcg
ggcaatcccttgccggaggatgcgcctgcggcggacatcgcccgcagcgactatctgatt
cgcatccagccggggatgcgttttcagccgcatccggcgttcgcccgggatgccgaaggg
cgctttcggtatcacgcactgacggcggcggatctggatggcatcaatcgtctggccgac
tttcctgaggtcggcacccgcgagttgaccgccgaggatttcgtccatcagatcaaacga
ctcgccgcgccctggctacactcgccgatcgcgggcgtgatgggacagcatattgtcggt
tttcaggagcttgccgggcagcttgagtcggcggcgggacagggaccgctggaacaggcc
gaaactttgcgccagtccagtctggcgggggtcgaggcggtggaccgcgaccactttcgg
atcagcctcaaggggaaatatccgcaattcgcctattggctggcgatgccctttttcgcc
ccgatgccttgggaggccgaggtcttttatgcacagccggggctggccgagcgcaacatc
acgctcgactggtatccggtcggcagcggtccttttttcctgagcgaaaataatccgaat
ctgcgcatggtgctggagcgcaacccgaattttcatggcgagtcctttccgactgaaggg
atgccgggcgatgccgaatccggaatcctcaccgacgcgggcaaaccgctcccctttatc
gaccgcgccgtctacagtctggaaaaggagagtatcccgcgctggaacaaattccttcag
ggctattacgacagctccggtatcgcctcggacgccttcgatcaggcggtccagatcgat
gttgagggcgagccgatcctgaccgacgcgatgcgcgaacaaggcatctcgctgctgacc
tcggtggagccttccagcttttatctgggcttcaacatgctcgatccggtcatcggcggc
gattcgccgcgtgcccgtctgttgcgtcgcgccatctccatcgcactggattacgaggaa
ttcatctcgatctttaccaatggacgcggcgtggtggcgcaggggccgattccgccgggc
atcttcggccatcgcgagggcgaggcggggatcaaccccttcgtttacgaatggcgcgac
ggtcggccggtacgccggagtctcgacgaggccaaggtgctgatggagcaggccggctac
ccgaacggcatcgagcgcgagaccggccgcacgctgaccatcaactacgaggcggtcgcg
accgggccggacgatcgcgcccgtctgaactggatccgcaagcagttcgccaagctcgga
atcgatctcgtcatccgctcgaccgactacaatcgctttcaggacaagctgcgcaacggc
accggacaggtcttcatgttcggttggaacgcggactatccggaccccgagaattttctc
tttctgctctatggacccaatggcaaggtcgagcatcagggcgaaaacgccaccaattat
gccaaccccgagttcgaccgactgttcgacgagatgaagttcatggacgacggtcccgag
cgtcaggccatcctcgatcggctggtcgaaatcgcgcgcaccgacgcgccctggatctgg
ggcttccatcccaaggcattcagcctgcatcatcagtggatggcgaacgcctctcccaat
cagatggccaacaacaccctgaaatatcgtcggatcgaccctgaactgcggaagcagaag
cgccaggactggaaccagccggtactctggccgctctgggtcggtgccggtctgctggtg
gcgctggtgctgccggcctggtggctggtgcgccggcgcgaacggaggaccgcactgtga
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