Thiocystis violascens: Thivi_1560
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Entry
Thivi_1560 CDS
T02138
Name
(GenBank) phenylalanyl-tRNA synthetase, beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
tvi
Thiocystis violascens
Pathway
tvi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tvi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Thivi_1560
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tvi01007
]
Thivi_1560
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tvi03016
]
Thivi_1560
Enzymes [BR:
tvi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Thivi_1560
Amino acid related enzymes [BR:
tvi01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Thivi_1560
Transfer RNA biogenesis [BR:
tvi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Thivi_1560
Prokaryotic type
Thivi_1560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
AFL73550
UniProt:
I3Y982
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All DBs
Position
complement(1700457..1702835)
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AA seq
792 aa
AA seq
DB search
MRFSEAWLREWVNPPVDTQQLADQLSMAGLEVDAVEPAAPAFSGVSIGLVQRIAPHPDAA
KLRICTVDLGQDEPLQIICGAANVAEGMKIPVATVGACLPGDFKIKKAKLRGVASFGMIC
SATELGLAETSDGILPLSADAPVGEDFRAWMALDDHCIEVDLTPDRGDCLGIAGLAREVA
VINRVPLRAPAVQPVAPTCDDRVTVRLLAPDACPRYVCRVIRQVDPTAATPVWMQERLRR
AGLRAISPVVDVTNYVMLELGQPMHGFDLAKLSGGIEVRLAQAGERLALLNGDEIELRAD
TLVIADANQAVAMAGIMGGAATGVGPETRDILLESAFFAPLAISGKARGYGFHTDSSHRF
ERGVDPQLQVRAIERATRLLLDIVGGQVGPVVEAVDATHLPRREPLHLREARVAWILGLE
LPATTIADVLERLGMAVERLDDGWRVTPPSARFDLVHEVDLIADIGRIHGYDNIPVSHAS
AASVTQSTPEAAFDLDRARLALVDRGFHEVITYSFVSPEIQSLVEPEADTLRLANPISAE
LSIMRTSLWAGLLQTARYNQTRQLERVRIFESGLRFRIGADGLRQEPGLAGLVIGTAAPE
QWGQQSGKVDFYDLKADVEALLALTGAPAQFRFVAGAHPALHPGQTARIEREGKPVGLMG
MLHPSLAAKLDLTGDAFLFELDLAPLADGILPRYAPISRFPGIRRDLAIVIDAQIGYERV
ADCVRAAATELLREVILFDVYTGKNVDSGRKSLALGLILQSSSQTLTEEIIEVEVGRILD
RLTSELDARLRD
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgcgattcagtgaggcttggctgcgcgagtgggtgaatccgccggtcgacacccaacaa
ttggccgatcagctcagcatggcgggtctggaagtggacgccgtcgaaccggcggccccc
gctttcagcggcgtctcgatcggcctggtgcagcgcatcgcgccccatccggatgccgcc
aagctgcgcatctgtacggtcgatctgggccaggacgaaccgctccagatcatctgcggc
gcggccaatgtcgccgagggtatgaagattccggtcgccacggtcggtgcctgtctgccc
ggcgacttcaagatcaaaaaggccaagctgcgcggtgtcgcgtccttcggcatgatctgc
tccgccaccgaactcggactggccgagacctccgatggcatcctgcccctgtcggcggac
gcccccgtgggcgaggacttccgcgcttggatggccctggacgaccattgcatcgaggtc
gacctgactccggatcggggcgactgtctcggcatcgccgggctcgcccgcgaggtcgcg
gttatcaaccgcgtcccgctgcgggcgcctgccgtgcaacccgtggcgccaacctgcgac
gaccgcgtgacggtgcgtctgctggctcccgacgcctgcccgcgctacgtctgccgggtc
atccgccaggtcgatccgaccgccgcaacgcctgtgtggatgcaggaacgcctgcgccgc
gccggactgcgcgcgatcagccccgtcgtggatgtcaccaactatgtcatgctcgaattg
ggtcagcccatgcacgggttcgatctcgccaaactcagcggcgggatcgaggtgcgtctg
gcccaggccggcgaacggctcgcgttgctcaacggcgatgaaatcgaactgcgcgccgac
accctggtgattgccgacgccaaccaggcggtggccatggccggcatcatgggcggcgcc
gcgaccggcgttggccctgagacccgcgatatcctgctcgaaagcgcctttttcgcgccg
ctcgccattagcggcaaggcgcgcggttacggctttcataccgattcctcgcaccgtttc
gagcgcggtgtcgacccgcaacttcaggtccgcgcgatcgagcgcgcgacccgtctcctg
ctggacatcgtcggcggccaggtcggccccgtggtggaagcggtcgacgcgacccatctg
ccgcgacgcgaacccctgcatctgcgcgaggcgcgcgtcgcctggattctcgggctcgaa
ctgcccgccacgaccatcgccgatgtgctggaacgcctgggcatggccgtcgaacgtctc
gatgacggctggcgggtcaccccgcccagcgcgcgtttcgatctggtccacgaagtcgac
ctgatcgccgacatcggccggatccatggctacgacaacatcccggtgagccacgccagt
gccgcctcggtcacccaatccacgcccgaggccgcgttcgatctcgaccgcgcgcgcctg
gccctggtcgaccgcggtttccacgaggtcatcacctacagtttcgtcagccccgagatc
cagtcgctggtcgaacccgaggccgacaccctgcggttggccaaccccatcagcgccgaa
ctctctatcatgcgcaccagcctctgggccggcctgttgcagaccgcccgttacaatcag
acccgtcaactggagcgggtgcggatcttcgagtcgggtctgcggtttcggatcggcgcc
gacggtctgcgacaggaaccggggctcgccggtctggtcatcggcacggccgctcccgaa
cagtggggccagcaatctggcaaggtcgatttttacgacctcaaggccgacgtggaagcc
ctgctggcgctgaccggcgcgcccgcgcaattcaggttcgtcgccggcgcgcatccggcc
ctgcatccggggcagacggcccggatcgagcgcgaagggaaacccgtgggtctgatgggg
atgctgcatccctcgctggccgccaagctcgatctcaccggcgacgcctttctgttcgaa
ctggatctggcaccgctggcggacggcatcctgccccgctatgcgccgatctcgcgtttc
cctggtattcgtcgcgatctggcgatcgtcatcgacgcacagatcggctacgagagggtt
gccgactgcgttcgcgccgccgccacggaactgctgcgcgaggtcatcctgttcgatgtc
tataccggcaagaacgtcgattctggacgaaaaagtcttgctttaggattgattttacag
tcttcttcccagacactgaccgaagaaatcattgaagtcgaggtagggcggattctggat
cgccttacttcggaacttgacgcacgattgagggattga
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