Thiocystis violascens: Thivi_1864
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Entry
Thivi_1864 CDS
T02138
Name
(GenBank) spermidine/putrescine-binding periplasmic protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
tvi
Thiocystis violascens
Pathway
tvi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tvi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Thivi_1864
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvi02000
]
Thivi_1864
Transporters [BR:
tvi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Thivi_1864
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
AFL73833
UniProt:
I3YA15
LinkDB
All DBs
Position
complement(2030838..2032130)
Genome browser
AA seq
430 aa
AA seq
DB search
MTEQDDRCPPVSHRRRRLCAALGAFACGAGALPAAPAVHTRGRVKLRVLGTHVTLREQIR
QRAEQDLGIELIFMPGGNAEVLYQGGARPDSFDLYEQWSNSIRILWSARSIQPIDTRRIA
LWSEVNDLTKTGRLTPEAPLGQGDAPYRLINVQPDGGLGATPSERISFLPYVHNVDAFGY
DTRVVPRGVAYETESWGWLLDPRWHGQVALVNDPTIGLFDAALAVQARGLMTFANIGDIS
KPELDQLFDILIQCKLDGHFSGFWSEVPESVGMMRDGRAALASMFSPAVAALNEGGIPAV
YAAPREGYRAWHGVMCLSANTRGRELDAAYDYMNWWLSGWAGAFVARQGYYISVPERARP
LLSPAEWDYWYEGKPAAEDLCGPDGELAVRAGTRRNGGSYWQRFGHVAVWNSVMDSYDYS
LPRWHELLLA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcaagacgatcgctgtccgcctgtctcccaccggcgccgccggctttgcgcg
gccctgggcgcgttcgcctgcggcgccggagccctgccggcggcgccagccgtccacacc
agggggcgcgtcaaactgcgggtgctcggcacccacgtcaccctgcgcgagcagattcgc
cagcgtgccgagcaggatctcgggatcgagctgatcttcatgccgggcggcaacgccgag
gtgctgtatcaagggggcgcccgcccggacagcttcgatctctacgagcagtggtccaac
agcatcaggattctctggagcgcccgctcgatccagcccattgacacccgccgtatcgcc
ctctggagcgaggtcaacgacctgaccaagaccggacgcctgaccccggaggctccgctc
ggtcagggcgacgccccttaccggctgatcaatgtccagccggatggcggcctgggcgcg
acgccgagcgagcgcatcagcttcctgccctatgtccataatgtcgatgccttcggttac
gacacccgcgtcgtcccgcgcggggtcgcctacgaaaccgaaagctggggctggctgctc
gatccgcgctggcacggacaggtcgcgctggtgaacgaccctaccatcggcctgttcgac
gccgccctggcggtccaggcgcgcgggctcatgacctttgccaacatcggcgacatcagt
aagcccgaactggaccaactcttcgacatcctcattcaatgcaagctggacggtcatttc
agcggcttctggagcgaggtgccggagtccgtggggatgatgcgcgacggccgggcggcg
ctcgccagcatgttctcgccggcggtcgccgcgctcaacgagggcggcatccccgcggtt
tatgccgcgccgcgcgaaggttaccgcgcctggcatggggtcatgtgtctgtcggcaaac
acccgcgggcgcgaactggacgcggcctatgactacatgaactggtggctgtcgggctgg
gccggtgccttcgtcgcgcgtcagggctattacatctccgtccccgagcgcgcgcgcccc
ctgctgtcgcccgccgagtgggattactggtacgagggcaagccggccgccgaggatctg
tgcggccccgatggcgagcttgcggtgcgcgccggcacccggcgcaatggcggctcctac
tggcaacgcttcggccatgtcgcggtctggaattcggtcatggacagctacgattacagc
ctgccgcgctggcacgagttgctgctcgcatga
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