KEGG   Thiocystis violascens: Thivi_1917
Entry
Thivi_1917        CDS       T02138                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (srp54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
tvi  Thiocystis violascens
Pathway
tvi02024  Quorum sensing
tvi03060  Protein export
tvi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tvi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Thivi_1917
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Thivi_1917
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Thivi_1917
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tvi02044]
    Thivi_1917
Enzymes [BR:tvi01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Thivi_1917
Secretion system [BR:tvi02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Thivi_1917
  Eukaryotic Sec-SRP protein
   Thivi_1917
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA Zeta_toxin cobW AAA_26 nSTAND3 AAA_33 AAA_16 NACHT AAA_30 KTI12 T2SSE AAA_19 AAA_14 APS_kinase Herpes_ori_bp YqeC AAA_31 Thymidylate_kin ATP_bind_1 ArsA_ATPase DnaB_C AAA_24 NTPase_1 SWI2_SNF2 Helicase_RecD TsaE ResIII cas_Cpf1_2nd AAA_28 NPHP3_N SRPRB ATPase_2 Viral_helicase1 AAA_17
Other DBs
NCBI-ProteinID: AFL73878
UniProt: I3YA60
LinkDB
Position
complement(2096551..2097957)
AA seq 468 aa
MFENLQDRFEGVLTNLRGQGRLTEDNIKETLREVRMALLEADVALPVVRRFVEEVREKAL
GEAVTRSLTPGQVLIKIVNDELVSIMGQANEQLDLTTQPPAVVLMAGLQGSGKTTSVAKL
ARWLQEKQKKSVMVVSCDVYRPAAIEQLKTVAAEVGAEFYPSSGDQDPVEIAKRALDSAR
KHYKDVLIVDTAGRLHVDVAMMDEIKAIHAALNPIETLFVVDAMTGQDAANTAKAFDEAL
PLTGVILTKTDGDARGGAALSIRQITGKPIKFLGTGEKTAALEPFHPDRVASRILGMGDV
VSLVEEVQAKVDRDKAEKLVKKLKKGKDFDLADFKEQLEQMNQMGGIASLMEKLPGMGQI
PEHVKNRANDREMGKLVAIINSMTLNERRFPAVIKGSRKRRIAAGSGTQVQDVNQLLKQF
MQMQKMMKKMKGGGMAKMMRSMQGRMPPGFGPGGGLPPGGMPPGGFPM
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgttcgagaatctccaggaccgttttgaaggcgtcctgactaatctgcgggggcagggt
cgcctgaccgaggacaacatcaaggagaccctgcgcgaggtgcgcatggccctgctggag
gcggatgtggcgctgccggtggtgcgccggttcgtcgaggaagtccgcgagaaggcgctc
ggcgaggcggtgacccggagtttgaccccaggtcaggtgctgatcaagatcgtcaacgac
gaactggtcagcatcatgggtcaggccaacgagcagcttgacctgacgactcagccgcca
gcggtggtgctgatggcgggcctgcagggttcgggcaagaccaccagcgtggccaaactc
gcccgctggctccaggaaaaacagaagaaatcggtcatggtggtcagttgcgacgtgtac
cgtccggccgccatcgaacagttgaagacggttgccgccgaggtgggtgcggagttctat
cccagcagtggcgaccaggatccggtcgagatcgccaagcgtgccctggacagcgcccgc
aagcattataaggatgtgctgatcgtcgataccgctggccgtctgcatgtggacgtggcg
atgatggacgagatcaaggccatccatgccgctttgaatcccatcgaaacgctctttgtt
gtcgacgccatgaccggccaggacgcggccaacaccgccaaggcgttcgacgaggcgctg
ccgctgacgggcgtgatcctgaccaagaccgacggcgatgcgcgcggcggcgcggcactc
tcgatccgccagatcacgggcaagccgatcaagtttctcggcacgggcgagaagacggcg
gcgctcgaacccttccatccggaccgggtcgcctcgcgcatcctcggcatgggcgatgtg
gtttcgctggtcgaggaggtccaggccaaggtcgaccgggacaaggccgaaaagctggtc
aagaagctcaagaagggaaaggacttcgatctggccgacttcaaggagcagttggagcag
atgaaccagatgggcggaatcgcgagcctgatggagaagctccccggcatgggacagatc
ccggagcatgtcaagaatcgggccaatgaccgagagatgggcaaactggtcgccatcatc
aactccatgaccctcaacgagcgccgttttccggccgtcatcaagggctccagaaagcgc
cggatcgcggccggttcggggactcaggtgcaggacgtgaatcagctgctgaaacagttc
atgcagatgcagaagatgatgaaaaagatgaagggcggcggcatggccaagatgatgcgg
tcgatgcagggccggatgccgccgggcttcgggccgggcggcggcttgccgccaggtggg
atgccgcccggcgggtttccgatgtga

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