Thiocystis violascens: Thivi_1940
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Entry
Thivi_1940 CDS
T02138
Name
(GenBank) type I secretion system ABC transporter, PrtD family
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
tvi
Thiocystis violascens
Pathway
tvi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tvi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Thivi_1940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvi02000
]
Thivi_1940
02044 Secretion system [BR:
tvi02044
]
Thivi_1940
Transporters [BR:
tvi02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Thivi_1940
Secretion system [BR:
tvi02044
]
Type I secretion system
Multiple protein transporter
Thivi_1940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
DUF5942
AAA_33
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AFL73900
UniProt:
I3YA82
LinkDB
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Position
complement(2123768..2125492)
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AA seq
574 aa
AA seq
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MNKHSRPVDELRAVLQASRNSFIYTGLFSAFINLLLLVPALYMLQVYDRVLASGSAMTLL
VLTLLVVGLYAMMGALELVRSRILVRVSARLDMALNGRLFAAMFDANLRGGGQTGIQPIQ
DLTALRQFLTGHGLFGFFDAPWIPVYMAVLFLMHPMIGWLAVGGALILIGLAIANELTTS
KPLAMANRQAVASNNYLQGNLRNAEALESMGMLGNVHRRWLAQHVAMLKLQSLASDRAGL
LINASKTIRITLQSLILGVGAYLAIQQIVTPGVMIAGSILMGRALAPIDMLINSWKGFLT
ARTAYDRLRNLLQSVPARAVNMRLPDPTGQVSFQEVVAAPPGSNVAVLKRISFEVEPGEV
IGVIGPSAAGKSTLARVMLGVWPSAAGAVRLDGAEISRWNREDLGPHIGYLPQDIELFDG
TVSENIARFGTVDAQKVVAAAQRAGVHEMILGLPKGYDTPVGVGGAVLSGGQRQRIGLAR
AMYGQPVLVVLDEPNSNLDEQGEAALVRAIAQLKSEGSTVFIITHRPSVLNGVDKILVLR
EGMLHLFAPREQVLPQFARPTAVSSVPGTSMAVG
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagcattcccgtcctgtcgacgaactgcgcgccgtgttgcaggcgagccgtaat
tccttcatttataccggtctgttcagcgccttcatcaatctgctgctgctggtgccggcg
ctgtatatgctgcaggtctatgaccgggtgctggcgagcgggagcgcgatgacgctgctg
gtgctgacgctgctggtggtggggctgtacgcgatgatgggggcgctggaattggtgcgc
tcgcggattctggtgcgggtgagcgcgcggctggatatggcgctgaacggacggctgttc
gcggcgatgttcgatgcgaatctgcgcgggggcgggcagacggggattcagccaatccag
gatctgacggcgctgcgacagtttctgaccggacatgggctgttcgggtttttcgacgcg
ccctggattccggtctatatggcggtgctgttcctgatgcatccgatgatcggctggctg
gcggtgggcggggcgctgatcctgatcgggctggcgatcgcgaacgagttgacgacgagc
aagccgctggcgatggcgaatcggcaggcggtggcgagcaataattatctccagggcaat
ctgcgcaacgcggaggcgctggagtcgatggggatgctgggcaatgtccatcggcgctgg
ctggcgcagcatgtggcgatgctgaaactgcagtcgctggcgagcgatcgggcggggctg
ctgatcaatgcgagtaagacgattcggattacgctgcagtcgctgattctgggcgtcggc
gcctatctggcgattcagcagatcgtgacgccgggcgtgatgatcgcgggctcgatcctg
atggggcgggcgctggcgccgatcgatatgctgattaattcctggaaagggtttttgacg
gcgcgcacggcctatgaccggctgcggaatctgttgcagtcggtgccggcgcgggcggtg
aatatgcgcctgccggatccgaccggacaggtcagcttccaggaggtggtggcggcgccg
ccggggtcgaacgtggcggtgttgaagcggatcagtttcgaggtggagccgggcgaggtg
atcggggtgatcgggccgagcgcggcgggcaagtcgaccctggcgcgggtgatgctgggg
gtgtggccgtccgcggcgggcgcggtgcgtttggatggggcggagatcagccgctggaat
cgggaggatctggggccgcacatcgggtatctgccgcaggatatcgagctgttcgacggg
acggtgagcgagaatatcgcgcgtttcggaacggtggatgcgcagaaggtggtggcggcg
gcgcagcgtgcgggggtgcacgagatgattctgggtctgccgaagggctacgacacgccg
gtgggcgtgggcggggcggtgctgtcgggcgggcagcggcagcggatcggtttggcgcgg
gcgatgtatgggcagccggtgctggtggtgctggacgagccgaattccaatctggacgag
cagggcgaggcggcgctggtgcgggcgatcgcgcagttgaagtcggaggggtcgacggtg
ttcatcatcacgcatcgtccgagcgtgttgaatggggtggataagattctggtgttgcgc
gaagggatgttgcatttgttcgcgccacgcgagcaggtgttgccgcagttcgcgcggccg
acggcggtgagtagcgtgccggggacgagtatggcggtggggtga
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