Thiocystis violascens: Thivi_2024
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Entry
Thivi_2024 CDS
T02138
Name
(GenBank) phytoene/squalene synthetase
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
tvi
Thiocystis violascens
Pathway
tvi00906
Carotenoid biosynthesis
tvi01100
Metabolic pathways
tvi01110
Biosynthesis of secondary metabolites
Module
tvi_M00097
Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Brite
KEGG Orthology (KO) [BR:
tvi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Thivi_2024
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tvi01006
]
Thivi_2024
Enzymes [BR:
tvi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
Thivi_2024
Prenyltransferases [BR:
tvi01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Thivi_2024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AFL73981
UniProt:
I3YAG3
LinkDB
All DBs
Position
complement(2201378..2202433)
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AA seq
351 aa
AA seq
DB search
MGPVTSHASAADIAACRDLLRDGSRSFYAASFLLPQRFRDPAIALYAFCRIADDAIDCVE
GDPVAQAAALTMLHKRLDRIYDGCPIDDPADRALADVVVNFAMPKRLLEALLEGFEWDAE
GRRYEDLSGIYDYSARVAGTVGAMMATLMGARSAELVARACDLGVAMQLTNICRDVGEDA
RNGRLYLPRQWLREVGIDPDEWLKEPVFNEALASVVQRLLQAAEMLYQRSDAGIAGLPIN
CRAGINAARYLYSEIGRQVERHGLDSISRRAVVPPQRKLQLLAPILGKAILTSRYIAAPA
LEETRFLVDAVVAATPQLKRSPALGSGGSRVIWVLELFEQLEERERAVSMR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgggtccagtgacctcgcatgcgtcggcggcggatatcgccgcttgtcgcgacctgctg
cgcgacggctcgcgctcgttttatgcggcttcctttttgttgccgcagcgcttccgcgat
ccggccatcgcgctctatgccttctgccgcattgccgacgatgccatcgattgcgtcgag
ggtgatccggtggcgcaagccgcagccctgaccatgctccataagcggctggaccggatc
tatgacggctgtccgatcgacgatccggccgatcgcgcgctggccgatgtcgtggtgaat
ttcgccatgccgaagcgtctgctcgaagccctgctggagggcttcgagtgggacgcggaa
ggacgccgctacgaggatctttcaggcatttacgactattcggcgcgggtcgccggcacc
gtcggcgccatgatggcaaccctgatgggcgcgcgctcggcggaactcgtcgcccgtgcc
tgcgatctgggcgtggccatgcagctcaccaacatctgccgtgacgtgggcgaggatgcg
cgcaacggtcggctctatctgccccggcaatggctgcgcgaggtggggatcgacccggac
gagtggctcaaggaacccgttttcaacgaggcgctggcgtccgtggtccagcgtctgttg
caggcggcggagatgctctatcagcgttcggatgccggcatcgccgggttgcccatcaac
tgtcgggcgggaatcaatgccgcgcgttatctctactccgagatcgggcgtcaggtggag
cggcacggactggattccatctcccgtcgcgccgtggtgccgccgcagcggaagttgcaa
ctcttggcgcccatcctcggcaaggctatcctgacctcgcgttatatcgccgcccccgcc
ctcgaagaaacgcgcttcctggtcgacgccgtcgttgccgcgacaccgcaactgaagagg
agcccagccttgggcagcggcggcagtcgcgtgatctgggtgctggagttgttcgagcaa
ctcgaagaacgcgagcgcgcggtcagcatgcgttaa
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