Thiocystis violascens: Thivi_2099
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Entry
Thivi_2099 CDS
T02138
Name
(GenBank) autotransporter-associated beta strand repeat protein
Organism
tvi
Thiocystis violascens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
PATR
Cadherin
Big_5
LapA
InlK_D3
Motif
Other DBs
NCBI-ProteinID:
AFL74052
UniProt:
I3YAN4
LinkDB
All DBs
Position
2279610..2287868
Genome browser
AA seq
2752 aa
AA seq
DB search
MRYNGITTGTKAQLLAAIGDPANWIGDNTTPYDLSLIGNFTFPVADTTAPTFDEAPATSD
VQQTTVDLSASIDEGGTVYYVVVADGATAPTSAQVVAGTTYSGVTIVASGNQAVGSSPFT
ASFDNIAGLSAGTAYDIYVVAQDDEGTPNLMATATKVDVTTVGSPPIFSSDGAVNFAENV
AGTVYDAELSSSNGTVTFSLSGVDASKFNLDTSTGVLTFKGAPDFEQPTDTGTNNVYDVI
IRATDDNGFTDQAVAITVTNESDVNFASADDASIASNSLTKSVTAGRTANITFSAASYFD
YYAPNENAGFPGGIYAYSGTDSEQELIIAVQSGYTFDLTSFKFAPDFSQNTDSVKVRFTS
GGSSYEDTYALSSDGQSGYYNLIIPSTHAVNDVTEVRIWALAYGEFQDFEIADIKSASNT
AFLTFETGNGTLSGVDTNSATFAHTASSSDFTIVAAASEVKLSSVLGDATARDGAEGLYF
GDSARETAVTVSIESGKAFDLVSFLLSNQNGNGLETFTITTNKGGSFTVDAGTSLAAVTA
TAPDTAAFQGITSFTVTAPTGGAFMELDHFELANISTSAADTTPPTIDGAASNPLNDATG
VAVTGDIVVDFSENVQFGSSGIITLRNVSTSEDVETFNVATVSSGTVTGSGGSTMTISAD
KLTINTSGNLLAGTQYSVRFSAGSIVDTATSPNLLAAISDDTTYNFTTAAPTVSLSVNNA
SIAEAAGTSTVTATLSAAASTDTQVTLTPSGTATDGGTDYSLSSTSITIAAGDTTGTATV
TAVQDALYEADETVILDITGVSGGGGATENGAQQQTITITDDDPSPTLSIADVSQNEGNS
GTSNMTFTVSLSAASGQTVSVDYATSNGTATSGVDYVAASGTLTFAPGETSKTFDVTIAG
DTTTESDETFTVTLSNASNATIADATATGTITNDDVPNPTITSATYNVATGTLVVNGTDF
PALAGANNDIDVSLLAIRGEGGMSSLYTLTDTPDVEITSATSFSVVLSATDRNAIDLITG
KNGTNSKNGSLYQLNASDNWAAGASAAANIVDSGNVVTVSNVPVPAITSATYNATTGVLT
VAGTGFVRQSGGPNDIDVHMLTVTGGNGGTRTLVDSIDVEVTNTTSFTLTLGTNDKAAVD
ALLNLNGTSSAQNTTYNLAAAEDWSLGSDTAVNVADLTGNGITVSGVPNAAPTFTALNGG
NTFTEAGAAVVIDGDVTVADTELDALDSGAGDYNGASLTIVRNGGANAQDVFGSSGNLGA
LTESGNLTFNSTTVGTVTTHSSGTLGLTFNGNATSAIVDSVLQAITYSNSSDAPPASVTL
DWTFNDGTTSTGTNQASVNIIGVNDAPTAISPTSGSVNTFDSTNATVATLAATDADHAAW
TFSIQSVTLGANSVINTNGAVFDLGTDGSESTAGAVASANLRAVNPSGLAAGTYTVTVRA
DDGETGGTFDQAVTITVSNDLVVTTTTIDSDAPSNYAADAADGSGLDLREALAYANAATG
PITVRFADTLSGTITLGGAYAVRDGVSLAMDSDTNNRTITLTGQSFALDGAFGMSVATGD
TLTIDSNLADDGSVTSALTKTGDGKLTLGGTNNTAGTGLNTLTASAGTLQIIAATNLGTD
GVTLSGGVTFATVGNTLEATNTFAIETGGATFNQTGSGHLTLSSQVSGSALLTKSGGGSM
TLSNDNDSFDGGVTLNNGTLNAQSANESLGYAGTVTLNGGTLVISNDTTFTNNIAVNGDA
TISNSAAVELSGVISGSEALTKSGAGVLTLSATNTHTGAVTVSAGTLALSGGASIGDSAA
VTVDSGATLSLTGGAETIGSLTGAGTVSLSYALTMGGNNADTTFSGVISSTNTSGIVKTG
TGTLTLTGNNTYTGSTTVSAGELTLNRSGGALADTTAVTVASGATLTVSQNDTVGSIAGA
GTITLGGNALTAGGNDQNTAFSGTISSGGGVLTKTGTGTLALSGANTIGEIYLTGGTLEI
GSTEALGSAYVEYQLGTTLGFATTGTFTNHFQQSNGAGTIAVDTGVTATISTLTGFNGFT
KTGTGTLALATGGSPDPGATTVSAGTLLLTGGGTYDGAITVNSGATLAGSATLYNTLTID
AGGILAPGATASGAGDLGSGHLSLTSGATLAIELGGTAASTGYDQLDVTGSVTLDGATLD
LSLINGFTPAGNSFILIDNDGSDAISGTFNGFAEGASLTVGASSFTISYAGGTDNNDVVL
TAAANQVPVINSPGGGASASLSVAENTTAVTTVAATDGDSDTISYSLGGGADAGKFSIDA
NSGALTFVTAPDFEAPTDIGDTTGNNTYVVEVRASDGNGGIDTQTLTVTVTDVGEGGGGG
GNPPPPPPPPPPPEPEPEPEPEPEPEPEPDIPPIEDWEDLPDDDGDGVPEVVEDFVPPLE
TGGVAGDGNGDGLLDRFQENVASVPIRNTDQVSENPDAPLVFVTLVGGASADAPTPDTGV
RITALRQLGAPLDKPADILMPLGLIGFDASLETGQTQAAFSLYIDGEIPVNGFWKQDAAG
DWVNLASAAFGGQTVSDGSKTRLDFVIEDGGPFDQDGLVNGQILDPGAPGCGPDSIDYLG
RHVAPHSTFNEQAYLARYADVAVAIAKGHFVSGEQHYVWFGESEGRLPNDVFNPRGYLCA
NPDVLKAVSEGVHFSTALQHYELFGAGERRQPGADAFDEASYRSVNEDVEAAIEAGHFSS
GYQHYILFGAAEGRDPGIGGALVLATAALTAPDNGDGLMLLGQSPLEMDLVD
NT seq
8259 nt
NT seq
+upstream
nt +downstream
nt
atgcgatacaacggtataaccacgggtacaaaagctcagttattagcagctataggcgac
cctgcgaattggattggtgataatacaacgccttatgatttatcactgattggtaatttt
acatttcccgtagccgacaccaccgcccccaccttcgacgaggcgccggccacatcggac
gtgcagcagaccacggtcgacctatcggccagcatcgatgagggcggcacggtctactac
gtcgtggtggccgatggcgccaccgccccgacttcggcacaggtggtcgcggggacgacc
tacagcggcgtcaccattgtcgccagcggcaaccaggcggtcggctcgtcgccgttcacc
gccagcttcgacaacatcgccggcctgtccgccggcaccgcctacgacatctatgtcgtc
gcgcaggatgacgagggcacgcccaacctgatggcaactgccacaaaagtggatgttacg
acagtcggcagtccacctattttttcatctgatggtgccgtcaattttgctgaaaatgtt
gcaggcacagtttacgatgccgagctcagcagctctaatgggacagtcactttctcatta
agcggtgtggatgcatcaaaatttaatctcgacacaagcactggcgttttgacattcaag
ggtgcaccagattttgagcaacccaccgacaccggaaccaataatgtctatgacgttatt
attcgtgccacagacgataatggcttcactgatcaagcagtcgccattaccgtaactaat
gagagtgatgtcaattttgcatcggcagacgatgcatctattgccagtaattcactaaca
aaatctgttactgctggacgaacggcgaatatcaccttttctgcggcatcttattttgat
tactatgcacccaatgaaaatgcgggattcccaggtgggatatatgcatactctggaact
gattctgagcaagagctcataattgctgttcagagtggttataccttcgacttgacaagt
ttcaagtttgcgcctgacttttcacaaaatacggattcggtcaaggtgcgcttcacatcc
gggggaagtagttatgaggatacttatgccttgtcatctgatgggcaatcgggatattac
aatctaattatcccaagtacccatgccgttaatgatgtcactgaagttcgcatctgggct
ttggcttatggtgaatttcaagattttgaaattgcggatatcaaatctgcctccaacacc
gcctttttgaccttcgagactggcaacggcacgctctccggcgtcgacacgaacagcgcg
acctttgcgcacacagcgtccagctcagatttcacgatcgtggccgccgccagcgaagtg
aagctgtcgtcggttcttggtgatgcgacggcgagagacggtgccgaggggctgtatttc
ggcgattcggcacgggagaccgccgttaccgtctccattgaatccggcaaggcgttcgat
ctggtgtcgttcctgctcagcaaccagaacggcaacggtttggagaccttcacgatcacg
acgaacaaaggtggctccttcaccgtcgatgccggcacctccctggcggcggttacggcg
acggcgccggacacggcggccttccaaggcatcaccagcttcacggtgaccgcgcccacc
ggcggcgcgttcatggaactggatcatttcgagcttgccaacatcagcacgtcagccgcc
gacaccaccccgcccaccatcgacggcgccgcttccaaccctctcaacgacgccaccggc
gtggcggtgaccggtgacatcgtcgtcgacttcagcgagaacgtgcagttcggcagcagc
ggcatcatcaccctgcgcaacgtctccacgagcgaggatgtggagacgttcaacgtcgcg
accgtgtcgagcgggaccgtcaccgggtctggcggctccacgatgacgatcagcgccgac
aagctgactatcaacacgagcggcaacctgctggccggcacccaatacagcgtgcggttt
tctgcaggctccatcgtcgataccgccacctcgcccaatctgctcgccgccatcagcgac
gacaccacctacaacttcaccaccgccgcgcccaccgtcagcctctcggtgaacaacgcc
agcatcgcggaagcggcaggtaccagcaccgtcaccgccaccctgagcgccgccgcctcg
accgacactcaggtcacgctcaccccgtccggcacggcgaccgacggcggcaccgactac
agcctctccagcaccagcatcaccatcgccgccggcgataccaccggcaccgcgaccgtc
accgccgtgcaggatgcgctgtatgaagccgatgaaaccgtcatcctcgacatcaccggc
gtgtcgggcggcggcggggcgacggagaacggggcgcagcagcagacgatcaccatcacc
gacgacgatccctcccccaccctctccatcgccgatgtcagccagaacgagggcaacagc
ggcacctccaacatgaccttcacggtcagcttgagcgccgcgtcgggccagacggtgtcg
gtcgactacgccacctccaacggcacggcgacgagcggcgtcgactatgtcgccgccagc
ggcaccctgaccttcgcccccggcgaaaccagcaagaccttcgacgtcaccatcgccggc
gacacgacgacggagtcggacgaaaccttcaccgtcaccctgtcgaacgccagcaacgcc
accatcgccgacgccacggccaccggcacgatcaccaatgatgacgtgcccaatccgacc
atcacttccgccacctataatgtcgcaaccggcacgctggtggtgaacggcaccgacttc
cctgccttggccggggccaacaacgacatcgacgtgtcgcttttggcgatccgcggcgaa
ggtgggatgagcagcctctataccttgaccgacacgccggatgtcgaaatcaccagcgcg
acaagcttcagcgtcgtgttgagcgccaccgaccggaatgccatcgacctcatcaccggc
aagaacgggacgaactcgaagaacggtagcctctatcagttgaacgcatccgacaactgg
gcggcgggcgccagtgccgcagcgaacattgtcgatagcggcaatgtcgttaccgtttcc
aacgtgccggtgccggcgatcacctcggccacctacaatgccaccaccggcgtgctgacg
gtggccggaaccggctttgttcggcagtcgggaggccccaacgatatcgacgtccacatg
ctgaccgtcaccggcggcaatggcggcacccggaccctggtcgattcgatcgatgtggag
gtgaccaacaccaccagcttcaccctgacgctcggcaccaatgacaaggccgcggtcgat
gccctgctgaacctgaacggtaccagcagcgcgcagaacaccacctataatctggcggcg
gctgaagactggtccctcggctccgacacggccgtgaacgttgccgatctgacgggcaac
ggcatcaccgtgtcgggcgtccccaacgccgcccccaccttcaccgctctgaacggcggc
aacaccttcaccgaggccggggccgcggtggtgatcgacggcgacgtcacggtggccgat
accgaactggacgcgctggattcgggcgccggcgattacaacggcgcctccctgaccatc
gtccgcaacggcggcgccaatgctcaggacgtgttcggcagcagcggcaatctcggtgcc
ttgaccgaaagcggaaacctgaccttcaacagcaccaccgtcggcacggtgaccacccat
tccagcggcacgctggggctcaccttcaacggcaacgccacctcggcgatcgtcgactcc
gtgctgcaggccatcacctacagcaactcgtccgacgcgccgccggccagcgtgacgctg
gactggaccttcaacgacggcactaccagcaccggcaccaaccaggcgtcggtcaacatc
atcggggtcaacgacgcgccgaccgccatctctcccacctccggcagcgtcaataccttc
gacagcactaacgccaccgtggcgacgctggcggcgaccgacgccgaccacgccgcctgg
accttctcgatccagtcggtcaccctgggtgcgaactccgtcatcaacaccaacggcgcg
gtgttcgatctggggacggacgggtcggaaagcacggcgggcgccgtcgccagcgcgaac
ttgcgtgcggtcaacccgagcggcctcgccgccggcacctacacggtgacggtgcgggcg
gatgatggggaaacgggcggcaccttcgatcaggcggtcacgatcaccgtctcgaacgat
ctggtggtgacgacgacgaccatcgactccgatgcgccctccaactacgccgccgacgcg
gccgacggcagcggcctggatttgcgggaggccctcgcttacgccaacgccgccaccggc
ccgatcaccgtccgcttcgccgacacgctatccggcaccatcaccctgggcggcgcctat
gcggtgcgcgacggcgtgagcctcgccatggacagcgacaccaacaaccgcacgatcacc
ctcaccgggcaatcgttcgcgctggacggtgccttcggcatgagcgtggcgaccggcgac
accctgaccatcgattccaatctggccgacgacggcagcgtcacctctgcgctgaccaag
accggggacggcaagctaacgttgggcggcaccaacaacaccgccggcaccgggctgaac
accctcacggcgagcgccggcacgttgcagatcatcgccgccaccaacctcggcaccgac
ggcgtgaccttgagcggcggcgtcaccttcgccaccgtcggcaacacgctcgaagccaca
aacacattcgcgatcgagaccggcggcgcaaccttcaaccagaccggcagcgggcacctg
acgctttctagtcaagtttccgggagcgcgctgctgaccaagagcggcggcggcagcatg
accctatcgaacgacaacgattcgtttgacggcggcgtgacgctgaacaatggcacgctt
aatgcacagtcagcaaacgagagtctcggatatgcggggacggtgacgttgaacggcggc
acgctcgtcatcagcaacgacacgaccttcacgaacaacatcgcggtcaacggcgatgcg
accatttccaacagtgccgccgtcgagctgtccggggtgatctccgggtcggaggcgctg
accaagtcgggggccggcgtgctcaccctgtcggcgaccaacacccacaccggcgccgtg
acggtgtcggcggggaccttggcgctctccggcggcgcgtcgatcggggactcggcggcg
gtgacggtggacagcggcgcgaccttgtcgctgaccggcggcgccgagaccatcggctcg
ctgaccggggccggaaccgtctccttgagctacgcgctgaccatgggcggcaacaacgcc
gacaccacgttctccggcgtgatttcgtcgaccaacaccagcggcatcgtcaagaccggc
accggcacgctgacgctgaccggcaacaacacgtacaccggctcgaccacggtgtcggcg
ggcgaattgacgctcaaccggtcgggcggggcgttggccgacaccacggcggtgacggtg
gcgagcggggcgacgctgacggtgtcgcagaacgacacggtcgggtcgatcgccggggcc
ggcacgatcacgttgggcggcaacgccctgaccgccggcggcaacgaccagaacacggcg
ttctccggcacgatcagcagcggcggcggcgtcctcaccaaaaccggaaccggcacgctg
gcgctgtcgggcgccaacacgatcggcgaaatctacctcaccggcggaacgctggagatc
ggatcgacggaggcgctcggcagcgcctacgtcgaataccaactaggaaccacgctcggc
ttcgccacgactggcaccttcaccaaccatttccagcagagcaacggggcgggcaccatc
gcggtggacacgggcgtgaccgcgaccatcagcaccctgacgggcttcaacggcttcacc
aagaccggcaccggcacgctggccctcgccaccggcgggagccccgatcccggcgccacc
acggtgtcggccggcaccctgctgctgaccggcggcggcacctacgacggtgccatcacg
gtgaacagtggcgcaacgctggcggggtccgccacgctctacaacacgctgaccatcgac
gcgggcggcatcctcgcccccggcgccacggccagcggcgcgggcgatctgggcagcggc
catctcagcctgaccagcggcgccaccctggccatcgaactcggcggcaccgccgccagc
acgggctacgatcagctcgacgtcaccggcagcgtcacgctcgacggcgcgaccctggat
ctgtcgctcatcaacggcttcaccccagcgggtaacagcttcatcctgatcgacaacgac
ggtagcgatgcgatcagcggcaccttcaacggattcgccgagggcgcgagcctgaccgtc
ggcgcttcctccttcacaatttcctacgctggcggtacagacaacaatgatgtggtcctg
acggcggcagccaatcaggtgccggtcatcaacagtcccggcggaggcgcctccgcctcg
ctcagtgtcgccgagaacaccacggccgtgaccaccgtcgccgccaccgatggcgatagc
gacacgatctcctacagcctcggcggcggcgccgatgccggcaagttcagcatcgacgcg
aactcgggcgcgctgaccttcgtcaccgcccccgacttcgaggccccgaccgacatcggc
gacacgactggcaataacacctacgtcgtcgaggttcgggccagcgacggcaatggcggc
atcgatactcagaccctaacggtgacggtgaccgatgtcggcgagggcggcggcgggggc
ggtaatcctcccccgcctcccccgcctcccccgcctcccgagcccgagcccgagcccgag
ccagaacccgagccagaacccgagcccgacatcccgcccatcgaggactgggaagacctg
cccgatgacgatggcgacggcgttcccgaagtggtcgaggatttcgtgccgccgctcgaa
acaggcggcgttgccggggatggcaatggcgacggactattggataggtttcaggagaac
gtcgcctcggtaccgatccgcaacaccgatcaggtgtccgagaaccccgatgccccgctg
gttttcgtcaccctggtcggcggggcgagcgcggatgcacccacgccggacactggcgtg
cgcatcactgccctgcgccaactcggcgccccgctggacaagccggcggatattttgatg
ccgctcggcctgatcggtttcgacgccagcctggaaaccgggcagacccaggccgccttc
agcctctacatcgacggcgagatcccggtcaacggcttctggaaacaggacgccgcgggc
gattgggtcaatctggccagcgccgcctttggcggacagaccgtcagcgacggcagcaag
acccggctggatttcgtcattgaggacggcggacccttcgatcaggatggcctcgtcaac
ggccagattctcgatcccggcgcgccgggctgcggtcccgactcgatcgactacctcggg
cgccacgtcgccccgcattcgacctttaatgagcaagcgtatctggcccgttacgccgat
gtcgcggtcgcgatcgccaagggacacttcgtcagtggcgagcagcactatgtctggttc
ggcgaatccgagggccgcctgccgaatgacgtcttcaacccccggggctatctctgcgcc
aatcccgacgtgctcaaggcggtgagcgagggggtgcatttcagcaccgcgctccagcac
tacgaactgttcggcgctggcgagcggcgccaaccgggggcggacgccttcgacgaggcg
tcctaccgctcggtcaatgaggatgtggaggccgccatcgaggcagggcatttcagtagt
ggctatcagcactacatcctgtttggcgccgctgaaggccgcgaccccgggattggcggc
gccttggtgttggccaccgccgcgctcaccgcgcccgataacggtgacggtctgatgctg
ctcggtcagtcaccgcttgagatggatctcgtggactga
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integrated database retrieval system
