KEGG   Thiocystis violascens: Thivi_2386
Entry
Thivi_2386        CDS       T02138                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
tvi  Thiocystis violascens
Pathway
tvi00300  Lysine biosynthesis
tvi00470  D-Amino acid metabolism
tvi01100  Metabolic pathways
tvi01110  Biosynthesis of secondary metabolites
tvi01120  Microbial metabolism in diverse environments
tvi01230  Biosynthesis of amino acids
Module
tvi_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:tvi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Thivi_2386
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Thivi_2386
Enzymes [BR:tvi01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     Thivi_2386
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N DUF1955
Other DBs
NCBI-ProteinID: AFL74331
UniProt: I3YBG3
LinkDB
Position
2607698..2608945
AA seq 415 aa
MDHFNERDGVLHAEDIPLTTIAERFGTPCYVYSRATLERHWRAFDRAFREHPHLICFAVK
ANSNLAVLNVLARLGSGFDIVSVGELERVLAAGGDPGKVIFSGVGKRADEIRRALEVGIR
CFNVESESELLRLDRLAGELGCKAPVSLRVNPDVDARTHPYIATGLKDNKFGIDIQSAEA
VYLRAAALPNLRIVGIDCHIGSQLTDLAPFIDALGRVIALADRLAQSGIILEHLDLGGGL
GIRYREEHPPEPAAYAAALSYQLASRPYEVILEPGRAIAGNAGILLTRVEYLKHGEHRHF
AILDAAMNDLLRPALYQANQDIVPVVRATDADPARYDLVGPVCETADFLGKERTLALRED
DLLAVRGSGAYGFTMSSNYNSRPRVAEVMVDGDRATLVRERETVASLFAGESVLP
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggatcatttcaacgaacgcgacggtgtccttcatgccgaggacataccgctcaccacc
atcgccgagcgtttcggcacgccctgttacgtctattcgcgggccacgctcgaacgccat
tggcgcgccttcgaccgcgcctttcgcgagcatccgcatctgatctgcttcgcggtcaag
gccaattccaatctggcggtactcaatgtcctggcccgcttgggctcggggttcgatatc
gtctcggtcggcgaactcgaacgggtgctggcggcgggcggcgatcccggcaaggtgatt
ttctccggtgtcggcaaacgcgcggacgagatccgccgcgcgctcgaggtcggtatccgc
tgcttcaatgtcgaatcggaatccgagttgctccggctcgatcgcctcgcgggcgaactc
ggttgcaaggcaccggtctcgctgcgggtcaatccggacgtggacgcccggacccatccc
tacatcgccaccgggctcaaggacaacaaattcggcatcgacatccagtccgccgaggct
gtctatctccgcgccgccgccctgcccaacctgcggatcgttggcatcgactgtcacatc
ggctcgcaactgaccgatctggcgcccttcatcgacgcgctgggccgggtcatcgccctg
gccgaccgtctggcgcagtccggcatcatcctcgaacatctggatctgggcggcggattg
ggcatccgctatcgcgaggaacatccgccggaacccgcagcctatgccgccgccctgagt
tatcagctcgccagccgcccctatgaggtcatcctggagcccggtcgcgccatcgccggc
aatgccggcatcctcctgacccgcgtggaatatctcaaacacggcgagcaccgccatttc
gcgattctcgacgcggccatgaacgacctgctgcgccccgccctctatcaggccaaccag
gacatcgtcccggtcgtgcgcgcgaccgacgccgaccccgcccgttacgatctggtcggg
ccggtctgcgagacggcggactttctcggcaaggaacgcaccctggccctgcgcgaggac
gacctgctcgccgtgcgcggcagcggcgcctatggtttcaccatgagttccaactacaac
agccgaccgcgcgtggccgaggtgatggtcgatggcgaccgggcgacgctggtgcgggaa
cgcgagaccgtcgccagcctcttcgcgggggagtccgtgctgccgtga

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