Thiocystis violascens: Thivi_2386
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Entry
Thivi_2386 CDS
T02138
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
tvi
Thiocystis violascens
Pathway
tvi00300
Lysine biosynthesis
tvi00470
D-Amino acid metabolism
tvi01100
Metabolic pathways
tvi01110
Biosynthesis of secondary metabolites
tvi01120
Microbial metabolism in diverse environments
tvi01230
Biosynthesis of amino acids
Module
tvi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tvi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Thivi_2386
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Thivi_2386
Enzymes [BR:
tvi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Thivi_2386
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
AFL74331
UniProt:
I3YBG3
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All DBs
Position
2607698..2608945
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AA seq
415 aa
AA seq
DB search
MDHFNERDGVLHAEDIPLTTIAERFGTPCYVYSRATLERHWRAFDRAFREHPHLICFAVK
ANSNLAVLNVLARLGSGFDIVSVGELERVLAAGGDPGKVIFSGVGKRADEIRRALEVGIR
CFNVESESELLRLDRLAGELGCKAPVSLRVNPDVDARTHPYIATGLKDNKFGIDIQSAEA
VYLRAAALPNLRIVGIDCHIGSQLTDLAPFIDALGRVIALADRLAQSGIILEHLDLGGGL
GIRYREEHPPEPAAYAAALSYQLASRPYEVILEPGRAIAGNAGILLTRVEYLKHGEHRHF
AILDAAMNDLLRPALYQANQDIVPVVRATDADPARYDLVGPVCETADFLGKERTLALRED
DLLAVRGSGAYGFTMSSNYNSRPRVAEVMVDGDRATLVRERETVASLFAGESVLP
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggatcatttcaacgaacgcgacggtgtccttcatgccgaggacataccgctcaccacc
atcgccgagcgtttcggcacgccctgttacgtctattcgcgggccacgctcgaacgccat
tggcgcgccttcgaccgcgcctttcgcgagcatccgcatctgatctgcttcgcggtcaag
gccaattccaatctggcggtactcaatgtcctggcccgcttgggctcggggttcgatatc
gtctcggtcggcgaactcgaacgggtgctggcggcgggcggcgatcccggcaaggtgatt
ttctccggtgtcggcaaacgcgcggacgagatccgccgcgcgctcgaggtcggtatccgc
tgcttcaatgtcgaatcggaatccgagttgctccggctcgatcgcctcgcgggcgaactc
ggttgcaaggcaccggtctcgctgcgggtcaatccggacgtggacgcccggacccatccc
tacatcgccaccgggctcaaggacaacaaattcggcatcgacatccagtccgccgaggct
gtctatctccgcgccgccgccctgcccaacctgcggatcgttggcatcgactgtcacatc
ggctcgcaactgaccgatctggcgcccttcatcgacgcgctgggccgggtcatcgccctg
gccgaccgtctggcgcagtccggcatcatcctcgaacatctggatctgggcggcggattg
ggcatccgctatcgcgaggaacatccgccggaacccgcagcctatgccgccgccctgagt
tatcagctcgccagccgcccctatgaggtcatcctggagcccggtcgcgccatcgccggc
aatgccggcatcctcctgacccgcgtggaatatctcaaacacggcgagcaccgccatttc
gcgattctcgacgcggccatgaacgacctgctgcgccccgccctctatcaggccaaccag
gacatcgtcccggtcgtgcgcgcgaccgacgccgaccccgcccgttacgatctggtcggg
ccggtctgcgagacggcggactttctcggcaaggaacgcaccctggccctgcgcgaggac
gacctgctcgccgtgcgcggcagcggcgcctatggtttcaccatgagttccaactacaac
agccgaccgcgcgtggccgaggtgatggtcgatggcgaccgggcgacgctggtgcgggaa
cgcgagaccgtcgccagcctcttcgcgggggagtccgtgctgccgtga
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