Thiocystis violascens: Thivi_2905
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Entry
Thivi_2905 CDS
T02138
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tvi
Thiocystis violascens
Brite
KEGG Orthology (KO) [BR:
tvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvi03032
]
Thivi_2905
03400 DNA repair and recombination proteins [BR:
tvi03400
]
Thivi_2905
Enzymes [BR:
tvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Thivi_2905
DNA replication proteins [BR:
tvi03032
]
Prokaryotic type
DNA Topoisomerases
Thivi_2905
DNA repair and recombination proteins [BR:
tvi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Thivi_2905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AFL74811
UniProt:
I3YCU3
LinkDB
All DBs
Position
complement(3193034..3195439)
Genome browser
AA seq
801 aa
AA seq
DB search
MTYDSTNIKVLRGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCKNINVT
IHADCSVTVVDDGRGIPVDMHAEENKSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSV
VNALSEKLNLRICKGGQIYEQEYRFGVPQYPLKAIDQTKRTGTEIRFYPSPNIFTNLDFH
YDILAKRLRELSFLNSGVKIALTEESTERKDVFEYQGGIRAFVEHLNKNKDPIHPTVIYF
SAERQSIGVELAIQWNSSYLETIYCYTNTIPQKDGGTHLAGLRAALTRTLNSYIEREGLD
RNQKIRPVGDDAREGLVAVLSVKVPDPKFSSQTKDKLVSSEVKAVVESLVAEQLGMFLEE
QPFEAKIIANKMLDAARAREAARKAREMTRRKGVLDIAGLPGKLADCQEKDPARSEIYLV
EGDSAGGSAKQGRDRAFQAILPLKGKILNVEKARFDKMLSSAEVGTLITALGCGIGREEY
NPDNLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPELVERGHIYIAQPPLFKIKKGKQE
EYLLDESALNYAMLQAALDDANLFVTKDALPLASTALESLALDYSVIVNIVKRLEKRYGT
EFLEAVIKAPRIDDLIISDLERLKSWCIQLEAILNHNEIPTFHYNVRVSEQSSKIPEYIE
VVRFIHGIHESRIVPLEFFRSIDYAKMLEYGQKLTGFLQSDAYVKRGERLKVITDLGDGI
RWLLTEAQKGYSTQRYKGLGEMNPEQLWDTTMNPETRRLLKVTIEDAVAADLIFTTLMGD
QVEPRRLFIEKNALNAENLDI
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgacatacgactcgacaaacataaaggtacttcgtggactcgacgcggtgcgcaaacgc
ccaggcatgtatatcggggatacggatgatggtacaggactacaccatatggtatttgaa
gtcgtagataactcaatcgacgaggctctagctggctactgcaagaatatcaatgtgaca
attcatgccgactgttcagttacagtagttgatgatgggaggggaataccagtcgatatg
catgcagaagaaaataaatcagctgcagaagtcatcatgaccgtattgcacgcaggaggc
aaatttgacgacaactcctataaagtctccggcggtttgcatggcgtaggcgtctcggtc
gtgaacgcactctcagaaaaattaaatctgcgcatttgcaagggagggcagatctatgag
caggaatatcgctttggcgtgcctcagtatccacttaaggctattgatcagacaaagcgc
acgggtaccgaaattcgcttttatccgtcacctaacatttttacaaatttggattttcac
tacgatatattagccaagcgtcttcgagaactatcatttcttaactcaggcgttaagata
gcgttaaccgaagaatctactgaaagaaaggatgtttttgaatatcaaggtggaattcgt
gcattcgtagaacatttgaataaaaacaaagatccaattcatccaacagtcatctatttt
agtgcagagagacaatcgattggagttgaattggctatccaatggaacagcagctatctc
gaaacaatttattgctatacaaacacgattccacaaaaagatggcggtacacatttggcc
ggattacgtgcggcactgacaagaacgcttaattcatatattgagcgtgaaggtttggat
cgtaatcaaaagatcaggcccgtaggcgatgatgctagagaaggccttgttgcggttctg
tctgtaaaggttccggacccaaagttttcatctcaaacgaaagacaaactggtgtcatcg
gaagtaaaagctgttgtcgagtcacttgttgccgagcagctaggtatgttcctcgaagag
cagccgtttgaagcaaaaatcatcgcaaataagatgcttgatgctgcacgagctcgtgaa
gctgctcgaaaagcacgagaaatgactcgccgtaagggcgttctcgacattgcaggatta
ccaggaaaattagctgactgtcaggaaaaagatcccgctagatcggagatctatctagtc
gaaggagactctgctggaggttctgcaaaacaaggaagggatcgagcttttcaagcaata
ttgccattgaaaggcaagatactgaatgtggaaaaggctcgcttcgataaaatgctctca
tccgcagaagttggaacgctgattacggcgcttggatgtggcatcggacgagaagaatat
aaccctgacaacttaaggtaccatcgcattatcatcatgaccgatgcggatgtagatggc
gctcatattcgtaccttgctcctgactttcttttataggcaaatgccagaattggtagag
agaggacatatttatatcgcgcagccccccttgtttaaaatcaaaaaaggaaaacaagaa
gaatatctgctcgatgagtcggctcttaattacgccatgctccaggcggcgctggatgat
gcgaatttattcgtcacgaaagacgcactgccattggcgagcactgcgctggagtcactg
gctttggattacagtgtgatcgtgaatatcgttaagcgactggagaaacggtatggcact
gaatttctggaagcagtgattaaagccccccggattgatgacctgattatttccgatctt
gagcgattaaagagttggtgtattcaattagaggccatacttaatcacaatgaaatacct
acatttcactataatgttcgagtcagcgaacaatcgtcgaaaatacccgaatatatcgag
gtagttcgatttattcacggcatccatgaaagccgtattgttccgttagagttttttcgc
tcaattgattatgcaaaaatgcttgagtacggccaaaagctaacaggttttctgcagtcc
gatgcctatgttaaacgtggcgagcggctgaaggttataacagatttgggagatgggata
cgttggttgctcacggaagctcaaaaagggtatagcacccaacgatacaaaggactcggt
gaaatgaatcccgaacagctttgggacaccacaatgaatccggaaacgcgccgtcttttg
aaagtgaccattgaggacgcggtcgctgcagatttgattttcactacattgatgggtgat
caagttgaaccgcgacgactatttatcgaaaaaaatgctctaaatgccgaaaacttagac
atttaa
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