Thiocystis violascens: Thivi_3323
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Entry
Thivi_3323 CDS
T02138
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
tvi
Thiocystis violascens
Pathway
tvi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tvi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Thivi_3323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvi03021
]
Thivi_3323
03400 DNA repair and recombination proteins [BR:
tvi03400
]
Thivi_3323
Enzymes [BR:
tvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Thivi_3323
Transcription machinery [BR:
tvi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Thivi_3323
DNA repair and recombination proteins [BR:
tvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Thivi_3323
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AFL75196
UniProt:
I3YDX8
LinkDB
All DBs
Position
complement(3635114..3635416)
Genome browser
AA seq
100 aa
AA seq
DB search
MARITVEDCLDHVDNRFDLVLLATKRARQLANGVEPILPWANDKPTVMALREIAAGHISN
AMVQAAQREMDETAAALEQAIAEGFRVDPSEPEQPGNALD
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaattaccgtcgaggattgtctcgaccatgtcgataaccgcttcgatctcgtc
ttgctcgccaccaagcgcgcacggcaactggccaatggcgtcgaacccattctgccctgg
gccaatgacaaacccaccgtgatggcgctgcgtgagattgccgccgggcatatctccaat
gccatggttcaggcagcccagcgggagatggacgagacggcggcggccctggaacaagcc
attgcggaaggctttcgcgtcgatccctcggaaccggagcagccggggaatgccctcgac
tga
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