Thiocystis violascens: Thivi_3347
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Entry
Thivi_3347 CDS
T02138
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
tvi
Thiocystis violascens
Pathway
tvi00550
Peptidoglycan biosynthesis
tvi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tvi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Thivi_3347
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tvi01003
]
Thivi_3347
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tvi01011
]
Thivi_3347
Enzymes [BR:
tvi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Thivi_3347
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Thivi_3347
Glycosyltransferases [BR:
tvi01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Thivi_3347
Peptidoglycan biosynthesis and degradation proteins [BR:
tvi01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Thivi_3347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AFL75217
UniProt:
I3YDZ9
LinkDB
All DBs
Position
3654027..3656369
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AA seq
780 aa
AA seq
DB search
MLWTLLLAAGIGVAGVLYGVHLDRVVRGKFEGQRWALPARVFARPLELYAGRALSPDQFQ
AELDRLNYRQAAEPSNPGTYRREGEHFRVHTRPFRFWDGQEPGRQLDIQLADQRVASLKD
TAGGPDPALVRLDAMLIASIYPTHNEDRLLVRGKDLPQLLVKTLMAVEDRNFDRHFGVDP
KGILRAAYSNLQAGSVVEGASTLTQQLVKNFYLNADRTFERKLKEAYMALLLERRYSKEE
ILEAYANEIYLGQDGSRAIHGFALASAFFFNKSLSEIGIPETALLIGLVQAPSSLDPRRH
PQAAKTRRDLVLDLMVRDGVILAEDAAQAKLAPLGLAEGGGRPVGEYPDFISLVRRQLQR
DYRDEDLRSEGLNIFTTLDPLVQSTVERSLPVQLAALEKSRRMKAGTLETAAVVTSVDQG
EVLAVAGGRKPGYAGFNRALDTVRSIGSLVKPAVYLTALSQPQRFTLTTSIQDTPVSLPD
GNKRWEPKNYDRRVNGSVPLSDALARSLNLATVNLGLSVGVKKVAETLYQLGVQRKIRVV
PSLLLGSVSMSPLEVAQMYQTIAASGYRAPLRAIREVVDARGQPLNRYPLAVEAVVDPKA
AYLTTWALQRVVTHGTARWLGEKLPEGMTMAGKTGTTDDMRDSWYAGFSGDKVAVVWVGR
DDYQPMGLAGGTGALRVWGDFMLALPNEPLSEFPPDGVVIANACGRSNVPYIGDSASRCG
SNGGGNASKRPGQGGGAGAETAAQTVEEPVAEREPPPPAPTPKPPQPASGKNLFMSDFYN
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
ttgctctggacgctcttgctcgcggcggggatcggcgtggccggcgtgctctatggcgtc
catctcgaccgcgtggtgcggggcaagttcgagggtcagcgctgggcgctgccggcgcgg
gtgttcgcgcgtccgctcgaactctatgccggtcgcgccttgagtccggaccagtttcag
gccgaactggatcgtctcaattatcgccaggccgccgaaccttccaatccgggcacctat
cgtcgcgagggcgagcactttcgggtgcatacccggcccttccgcttctgggacggtcag
gaaccaggccggcaactcgatatccagcttgccgaccagcgggtcgcgagcctgaaggat
accgctggcggtcccgatccggcgctggtccggctcgatgccatgctgatcgccagcatc
tatccgacgcacaacgaagatcgcctgctggtacggggcaaggatctcccccagcttttg
gtcaagaccctgatggcggtcgaggatcgcaatttcgaccgtcacttcggcgtggatccc
aagggtatcctgcgcgccgcctacagcaacctgcaggccggttcggtggtcgagggcgcc
agtaccctgacccagcagttggtcaaaaatttctatctgaacgccgaccgcaccttcgag
cgcaagctcaaggaagcctatatggcgctcctgctggagcgacgctacagcaaggaggag
atcctggaagcctatgccaacgagatctatctcggtcaggacggcagccgcgcgatccac
ggattcgcgctcgcaagcgcgtttttcttcaataaatcgctgagcgagattgggatcccg
gaaaccgcgctgctgatcggcttggtccaggcaccctccagtctggatccgcgacgtcat
ccgcaagccgctaaaacgcgccgcgatctagtgctggatctcatggtccgcgatggcgtg
attctggccgaggacgccgcgcaggccaagctggccccactagggctggcggagggcggc
gggcgtccggtcggcgagtatcccgatttcatctcgctggtcaggcgccaattgcagcgc
gactatcgcgacgaggatctgcgttccgaggggctgaatatcttcacgaccctggatccg
ctggtgcagtcgacggtcgagcgatcgctcccggtccaattggccgcgctggaaaagtcc
cgccgtatgaaagccggaaccctggaaaccgcggcggtggtgacctcggtggatcagggc
gaggtgctggccgtggccggggggcgcaagccgggctacgcgggcttcaaccgggcgctc
gacaccgtccgctcgatcggctcgctggtcaagccggcggtttatttgaccgctttgtcg
caaccccagcgtttcaccctgaccaccagcattcaggataccccggtcagtctgcccgac
ggcaacaaacgctgggagccgaaaaactacgaccgccgggtcaatggctcggtgccgctc
tccgacgcgctggcccgttcgctgaatctggcgacggtgaatctcgggctcagtgtcggg
gtgaaaaaggttgccgagacgctctatcagctcggggtgcagcggaagatccgggtcgtc
ccctcgctgttgctgggctcggtgtccatgtcgccgctcgaagtggcgcagatgtatcag
accatcgcggcgagcggctatcgagcgccgctgcgggcgattcgcgaggtcgtggatgcc
cggggtcagccgctgaaccgctatccgctcgcggtcgaggcggtggtcgaccccaaggcc
gcctatctcaccacctgggccctgcagcgggtggtgacccatggaaccgcccgctggctg
ggggaaaaattgccggaaggcatgacgatggcgggcaagaccggcaccaccgacgacatg
cgcgacagttggtacgccggcttttcgggcgacaaggttgccgtggtctgggtcggccgc
gacgactatcagcccatggggctcgccggcggcaccggcgcgttgcgggtgtggggcgat
ttcatgctggcgctgcccaatgagccgctgtccgagttcccgcccgatggcgtcgtgatc
gcgaatgcctgcgggcgttcgaatgtgccctacatcggcgacagcgcatcccgctgcggc
agcaacggtggcggaaacgccagcaagcgacccggtcagggtggtggcgctggcgcggag
acggccgctcaaaccgtcgaggaaccagtcgccgagcgtgagccgccgccccccgcgcca
acgccaaaaccgcctcagccagcgagcggcaaaaatctgttcatgagcgatttttacaat
taa
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