KEGG   Thiocystis violascens: Thivi_3349
Entry
Thivi_3349        CDS       T02138                                 
Name
(GenBank) DNA helicase, Rad3
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
tvi  Thiocystis violascens
Brite
KEGG Orthology (KO) [BR:tvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tvi03400]
    Thivi_3349
Enzymes [BR:tvi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     Thivi_3349
DNA repair and recombination proteins [BR:tvi03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Thivi_3349
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2
Other DBs
NCBI-ProteinID: AFL75219
UniProt: I3YE01
LinkDB
Position
3657518..3659449
AA seq 643 aa
MRPVSDLSPIFGPDGVLAERVPGFRYRAQQQAMAERIAAIMDTGGVLICEAGTGTGKTFA
YLAPALLSRRKVLISTGTRNLQDQLFHRDLPLIREALGLPVSSALLKGRANYLCRHRLHL
LLDDPGHLSPELRHHLQQVRDWSTSTRRGDIAELPLPEDAPIWPEVTSTSDNCLGQDCPD
WQGCHLVAARREAQAADVVVVNHHLLCADLALKDEGFGEILPGADCFVIDEAHQLPDTAS
NFFGISLSSRQLLDLARDTELEARREAGDVPELPERAGKLRRAVQDARLGLGDADRRGPW
REFAGDPGVQRALETLERRLSSLAEALKAMSGRGKGLDACLARAGDQRERLHTLVASEPE
DAVRWFETLGRGFRLHQTPLEVAEVFREQIGQERTAWIFTSATLAVGHDFGHFARQLGIE
EAQTERWESPFDYPNQALWFVPRGLPPPSDPDYNRQVLELAQEVIGYSRGRAFLLFTSHR
ALRELAAGLEGRIDYPLLIQGSAPRAELLERFRELGNAVLLGTSSFWEGVDVRGEALSCV
LIDRLPFASPGDPVLAARIDALRQRGGNPFRDYQLPQAVIALKQGAGRLIRGSEDRGVLV
VCDPRLLSRSYGYTFLDSLPAMARTRQIEDVRAFFGAGTDAGG
NT seq 1932 nt   +upstreamnt  +downstreamnt
ttgcgccccgtgtctgatctgtcaccgatttttggccccgacggggtgctcgccgaacgg
gtgcccggcttccgctaccgggcgcagcagcaggcgatggccgagcggatcgccgccatt
atggacactggcggcgtcctgatctgcgaggccggcaccggcaccggcaagaccttcgcg
tatctggccccggcgctgctgtcccgacgcaaggtgctgatctccaccggcacgcgcaat
cttcaggatcagttgtttcatcgcgatctgccgttgatccgggaggcgctcggcctgccg
gtatcgagcgcgctgctgaaaggccgcgccaattatctctgccgtcatcggctccatctg
ctgctggatgaccccggccacctctcccccgaactgcgtcaccatctccagcaggtgcgc
gactggtccacgtccacccggcgtggcgacatcgccgagttgccgctccccgaggatgcc
ccgatctggcccgaggtcacctcgaccagcgacaactgtctcggtcaggactgcccggac
tggcagggctgccatctggtcgccgcccgccgcgaggcccaggcggccgatgtagtggtc
gtcaatcatcatctgctgtgcgccgatctggcgctcaaggacgaggggttcggcgagatt
ctgccgggcgccgactgcttcgtgatcgacgaggcgcaccagcttcccgacaccgcgtcg
aacttcttcggtatctcgctcagtagccgtcaactgttggatctggcgcgcgacaccgaa
ctcgaagcgcgccgcgaggcgggcgatgtcccggaactgcccgagcgcgccggcaaactg
cgccgcgcggtgcaggatgcgcggctcgggttgggcgatgcggatcgccgcggtccctgg
cgcgaattcgccggcgatccgggcgttcagcgggcgctggaaacgctcgaacgccgcttg
tcttcattggccgaggcgctcaaggcgatgtcgggccggggcaagggactggatgcctgc
ctggcgcgggccggggatcagcgggagcgtctgcataccctggtggccagcgagcccgag
gacgccgtgcgctggttcgagaccctggggcgcggtttccggctgcatcagactccgctg
gaggttgccgaggtctttcgcgagcagatcggccaggagcgcaccgcctggatcttcacc
tcggccaccctcgcggtcggccacgatttcgggcatttcgcccgccagctcggcatcgag
gaggcccagaccgaacgctgggaaagccccttcgactaccccaatcaggcgctctggttc
gtcccgcgcggtctgccgccgccgtccgatcccgactataaccggcaggtgctcgaactg
gcccaggaggtgatcggctacagccgtgggcgcgcctttctgctcttcaccagtcaccgc
gcgctgcgcgaactggccgccgggctggagggccggatcgactatccgctgctgatccag
ggcagcgcgccacgcgccgagctgctggaacgctttcgcgaactcggcaacgcggttctg
ctcggtacctcaagcttttgggaaggcgtcgacgtgcgcggcgaggcgctgtcctgtgtc
ctgatcgaccgtctgccgttcgcctcgccgggcgatccggtgctggccgcgcgcatcgac
gcgctgcgccagcgcggcggcaatcccttccgcgactatcaattgccgcaggccgtgatc
gcgctcaagcagggcgccgggcgtctgattcgcggcagcgaagatcgcggcgtgctggtc
gtctgcgatccgcgcctcctgtcgcgctcctatggctatacctttcttgacagcctgccg
gcgatggcccgtacccgccagatcgaggatgtccgggcgttttttggcgcggggacggat
gccggcggatga

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