Thiocystis violascens: Thivi_3644
Help
Entry
Thivi_3644 CDS
T02138
Name
(GenBank) site-specific recombinase XerD
Organism
tvi
Thiocystis violascens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
DUF3435
Motif
Other DBs
NCBI-ProteinID:
AFL75498
UniProt:
I3YET0
LinkDB
All DBs
Position
complement(3974474..3975550)
Genome browser
AA seq
358 aa
AA seq
DB search
MASIRKLESRAKPWQVRIRRKGQEFTEYFRTKKEADAFAATVEADFDKWSKLLGGELRRH
TLADLIDRYLTIHQGKDHNLPSRLAWWKERYGKLLLSEFSSDTARDALAGMEIEPVARGA
NPIAPDSQPRTGPTINRYKSALSACYKAGIDRGWFGLQSNPLTGIRARKEVGNRFGRSLE
DGERERLVAACERSTYAGMGIFVRLALATGARRGELVKLEWRDVDLKGGSILLRNTKNGD
DRRVPLIGEARDRLTEWAKVRKLDDPRVFPGSTPTRPPNLERAWSKAKEVAGVENLRIHD
LRHSCGSYLAKAGASAFQIAAILGHRSGPGLTARYVHLVAEDSRALMESALSGITRNR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaatccgcaaactcgaaagccgcgcgaagccctggcaggtgcggatccgtcgc
aagggtcaagagttcaccgaatacttccgcaccaagaaagaagccgacgccttcgccgcg
acggtcgaagccgacttcgataagtggtcaaagttgttgggcggggaactgcgccgtcat
accctcgccgatctgatcgaccgctacctgaccatccaccaaggcaaggatcacaatctc
ccatcgcgcctagcatggtggaaggaacgctatgggaagctgttactgtcagagttttcc
tcagataccgcgcgcgatgccttggctggaatggagatcgagccagttgccagaggcgct
aacccgatcgccccggacagccagccgcgcaccggcccaacgatcaaccgctacaaaagc
gcactgagtgcctgctacaaggccgggatcgaccggggatggttcgggctgcaaagtaac
ccgctgaccggcatccgcgcgcgtaaggaggttggcaatcgcttcggtcggtcgctggag
gatggcgagcgcgagcgtcttgtcgccgcctgcgaacggtcaacatatgcggggatgggg
atctttgttcggctggcgctggcgacgggcgcgcgacgtggcgaacttgtcaaactcgaa
tggcgcgacgtggatctaaaaggtgggtcaatcctgctgcgcaacaccaagaacggcgat
gatcggcgcgtcccgctgatcggcgaggcccgcgaccgactgaccgaatgggccaaggtc
cgtaagctggacgatccccgcgtgttccctggctccacgcccacccgaccgcccaacctg
gaacgggcgtggtccaaggccaaagaagttgcaggcgtcgagaacctgcgcatccatgac
ctacgccatagttgcggttcctacctcgccaaagcgggcgcatccgctttccagatcgcc
gccattctcgggcaccgctccggccctggattgaccgccagatatgtacatctcgtcgcc
gaagattcgcgcgccttgatggaatccgccttgagcggcattacccgcaaccgctaa
DBGET
integrated database retrieval system
