Trinickia violacea: FAZ95_02420
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Entry
FAZ95_02420 CDS
T09503
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tvl
Trinickia violacea
Pathway
tvl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FAZ95_02420 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvl03400
]
FAZ95_02420 (mutM)
Enzymes [BR:
tvl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FAZ95_02420 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FAZ95_02420 (mutM)
DNA repair and recombination proteins [BR:
tvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FAZ95_02420 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
RNHCP
Motif
Other DBs
NCBI-ProteinID:
QCP48143
UniProt:
A0A4P8IMQ7
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All DBs
Position
1:554079..554909
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AA seq
276 aa
AA seq
DB search
MPELPEVEVTRRGIEPYVAGRRVERVDVRTRALRWPVPADFASTLARQLIRKVERRGKYL
LFEIDDGWFIVHLGMTGTLRVLRHMAEPPAPAKHDHIDWIFDEFILRFRDPRRFGAVLWH
PREAGDVLEHPLLAALGVEPFSPEFSGTLMHRRTRGRKVSVKQALLAGDIVVGVGNIYAS
ESLFRAGIRPTTSAGRVSLARYDLLAAAVRATLAAAIDKGGSTLRDFVGSDGESGYFQLD
YFVYDRAGLPCRVCGAPIKQIVQGQRSTYFCPHCQR
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagcttccagaagttgaagtcacccggcgcggaatcgagccgtacgttgccggg
cgccgcgtcgaacgagtcgacgtgcggactcgggcgctgcgctggccggtgcccgcggat
ttcgcgagcacgctggccaggcagttgatccgcaaagtcgagcggcgcggcaagtatctt
ctgttcgaaatcgatgacggctggttcatcgtccatctcggcatgactggcaccctgcgc
gtgttgcggcatatggccgagccgcccgcgcctgcgaagcacgatcacatcgactggatt
ttcgacgaatttattctgcgcttccgtgacccacgccgctttggcgcagtactttggcat
ccgcgcgaggcgggcgatgtgctcgagcatccgctgcttgccgcgctgggcgtcgagccg
ttctcgcccgagttttccggaaccctgatgcaccggcgcacgcgaggccgaaaggtttcc
gtcaagcaggcgctgctagcgggggatatcgtggtcggtgtgggcaatatctacgcgtcc
gaaagcctctttcgcgcgggcatccggccgacgacctccgccgggcgagtctcgctcgcg
cgctacgatttgcttgccgccgcagtgcgtgcaacgcttgccgccgcgatcgacaaaggc
ggcagcacgttgcgcgatttcgtcggcagcgacggcgaaagcggatattttcagctcgac
tattttgtctatgatcgcgcaggtctgccgtgccgcgtgtgcggcgcgccgatcaagcaa
atcgtccaagggcagcgttccacttatttttgtcctcattgccagcgttga
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