Trinickia violacea: FAZ95_02460 Help Entry FAZ95_02460       CDS       T09503                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism tvl  Trinickia violacea Pathway tvl02020   Two-component system tvl02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:tvl00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     FAZ95_02460  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     FAZ95_02460  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tvl03021]     FAZ95_02460 Transcription machinery [BR:tvl03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      FAZ95_02460 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_38 HTH_23 HTH_Crp_2 TRF Motif Other DBs NCBI-ProteinID:  QCP48150 UniProt:  A0A4V1EGW1 LinkDB All DBs Position 1:complement(560117..561625) Genome browser AA seq 502 aa AA seqDB search MKASLQLRLSQHLALTPQLQQSIRLLQLSTLELQQEVAMAVAQNPLLESEDEWIASPLRV AADGSVIAQTPNASSPEPMPGASNSSSPAENADGGEPQSVDEYNGLASDSGSDASQWNLD DYGRSGNASDDDDLPPLQIHESTTTLRDHLMAQLRVTQASQRDRALITFLIESLDDDGYL TASLDEVLADLPEELEVDLDELNAALALLHSFDPAGVGARTASECLKLQLHRLDASPTRT LALEIVAHHLELLAARDFTRLRKQLKANDDDLRDAHALIRSLEPFPGAAYGKAEADYVVP DIMVRRTAQGWQAELNPEVVPRLRINHLYANILRNSRGDPGSGSLRQQLQEARWLIKNIQ QRFETILRVAQAIVERQKNFFTHGEIAMRPLVLREIADTLGLHESTVSRVTTGKYMLTPF GTLEFKYFFGSHVSTDTGGAASSTAIRALIKQLIGAEDTKSPLSDSRIAELLAEQGFVVA RRTVAKYREALKIPAVNLRKSL NT seq 1509 nt NT seq  +upstreamnt  +downstreamnt atgaaagccagcctccaactccgcctatcgcagcatctcgcgctgacgccacaactgcag cagtcgatccggctgctgcagttgtctacgctcgaactgcaacaagaagtcgcgatggcg gtcgcgcaaaatccgctgctcgaaagcgaagacgaatggatcgcgagtccgctgcgcgtc gcggcggacgggtcggtgattgcgcaaacgccgaacgcgagcagtcccgagccgatgccc ggcgcgtcgaattcctcgagccctgccgaaaatgccgacggcggcgaaccgcaaagcgtc gacgaatacaacggtctagcctcggacagcggctccgacgcgagccaatggaatctcgac gactacggccgctccggcaacgcgtcggatgacgacgacttgccgccgctgcaaatccac gaatcgacgaccacgctgcgcgaccacctgatggcgcaactgcgcgtcacgcaagcgagc caacgtgaccgcgcgctgatcacgttcctgatcgaatcgctcgacgacgacggttacttg accgcctcgctcgatgaagtgctcgccgatttgccggaagagctcgaagtcgatctcgac gaattgaacgccgccttggcactgctgcacagcttcgatccggccggggtcggtgcacgc acggcttccgaatgcctgaagctgcaactgcatcgcctcgacgcatctcctacgcgcacg ctcgcactcgaaatcgtcgcccatcatctggaactgctcgcggcacgcgatttcacgcgc ctgcgcaaacaactgaaggccaatgacgacgacctgcgcgacgcccacgcgctgatccgc tcgctcgaacccttccccggcgccgcctacggcaaggccgaggccgactacgtcgtgccg gacatcatggtgagaagaactgcacaaggctggcaggccgaactgaatcccgaggtggtg ccgcggctgcgcatcaatcacctttacgcgaatattttgcgcaacagccggggcgatccc ggcagtggctcgctgcgtcaacagctgcaagaagcgcgttggctgatcaaaaatattcaa caacgattcgagacgattctcagggtcgcgcaagccattgtggagcgtcaaaagaacttt ttcacgcacggcgaaattgcgatgcgccccttggttttgcgggaaatagctgatacgctg gggctacacgagtcaacggtctcgcgtgtgacaaccgggaagtacatgcttaccccgttt gggacgcttgaatttaagtacttctttggatctcacgtttcgaccgatacggggggcgcg gcctcatcaacggccattcgcgcactcatcaagcaactgataggagctgaagacaccaaa tctcctctttcagacagccgcatagccgaactgctggcggaacaaggattcgtggtcgca cgccgcacggttgccaagtaccgcgaagccctcaagattcccgcagtgaatttgcgcaag tctttgtag

DBGET integrated database retrieval system