Trinickia violacea: FAZ95_03960
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Entry
FAZ95_03960 CDS
T09503
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
tvl
Trinickia violacea
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvl03036
]
FAZ95_03960 (xerD)
Chromosome and associated proteins [BR:
tvl03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
FAZ95_03960 (xerD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
QCP48417
UniProt:
A0A4P8IL03
LinkDB
All DBs
Position
1:873794..874744
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AA seq
316 aa
AA seq
DB search
MTDATHVTVFAEDAPPPSPSFTASTDSIDAFCDALWLEHGLSRNTLDAYRRDLRLFAEWL
ASTHSASIDGASELHLNGYIAARRGDKATSANRRLSVFRRFYAWAVRERRAASDPTLKIR
SAKQPPRFPSTLTEAQVEALLGAPDIDTPLGLRDRTMLELMYASGLRVTELVTLKTVEVG
LNEGVVRVLGKGSKERLIPFGEEAHGWIERYLRDARPALLGARAADALFVTNRGDGMTRQ
QFWNIIKRHARAADVHAPLSPHTLRHAFATHLLNHGADLRVVQLLLGHTDISTTQIYTHV
ARERLKSLHAAHHPRG
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgccacccatgtcaccgttttcgctgaagacgctccgccgccatcgccgtcg
ttcacggcgagcaccgattcgatcgatgcgttctgcgacgcgctgtggctcgagcacggc
ctctcgcgcaacacgctcgacgcctatcgccgcgacttgcgtctgtttgccgaatggctc
gcgagcacgcattcggcgtcgatcgacggtgcgagcgaactccatttgaacggctacatc
gccgcgcgccgcggcgacaaggcgacttcggcgaaccggcggctctcggtgtttcggcgc
ttctacgcgtgggcggtgcgcgagcgccgcgccgcatccgacccgacgctcaagatccgc
tccgccaagcagccgccgcgtttcccgtcgacgctgaccgaagcgcaagtcgaagcgctg
ctcggcgcgcccgatatcgatacgccgctcggcctgcgcgaccgcacgatgctcgagctg
atgtacgcgagcggcttgcgcgtcaccgagctcgtcacgctgaagacggtcgaagtcggc
ctgaacgaaggcgttgtacgcgtgctcggcaagggttcgaaggaacggctgataccgttc
ggcgaggaggcgcacggctggatcgagcgctatctgcgcgacgcgcggcccgcgttgctc
ggcgcacgcgcggcggacgcgctcttcgtgacgaaccgcggcgacggcatgacgcgtcag
cagttctggaacatcatcaagcgccatgcgcgcgcggcggatgtgcacgcgccgctgtcg
ccgcacacgctgcggcacgcgttcgcgacgcacttgctcaatcacggcgcggatctgcgc
gtcgtgcaactgctgcttgggcacaccgatatctcgacgacgcagatctacacgcacgtg
gcgcgcgagcggctcaagtcgctgcacgcggcgcatcatccgcgagggtga
DBGET
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